Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AlkB | alkB1 | DR97_4621 | DR97_5595 | annotation not available | Alkane 1-monooxygenase 1; Catalyzes the hydroxylation of n-alkanes in the presence of a NADH-rubredoxin reductase and rubredoxin. It preferably hydroxylases C16-C24 hydrocarbons | 0.863 |
AlkB | alkT | DR97_4621 | DR97_2720 | annotation not available | Putative rubredoxin reductase; Involved in the hydrocarbon hydroxylating system, which transfers electrons from NADH to rubredoxin reductase and then through rubredoxin to alkane 1 monooxygenase | 0.744 |
AlkB | rubA1 | DR97_4621 | DR97_2722 | annotation not available | Involved in the hydrocarbon hydroxylating system, which transfers electrons from NADH to rubredoxin reductase and then through rubredoxin to alkane 1 monooxygenase | 0.855 |
AlkB | rubA2 | DR97_4621 | DR97_2721 | annotation not available | Rubredoxin 2; Involved in the hydrocarbon hydroxylating system, which transfers electrons from NADH to rubredoxin reductase and then through rubredoxin to alkane 1 monooxygenase | 0.888 |
DR97_5749 | alkB1 | DR97_5749 | DR97_5595 | annotation not available | Alkane 1-monooxygenase 1; Catalyzes the hydroxylation of n-alkanes in the presence of a NADH-rubredoxin reductase and rubredoxin. It preferably hydroxylases C16-C24 hydrocarbons | 0.899 |
DR97_5749 | alkT | DR97_5749 | DR97_2720 | annotation not available | Putative rubredoxin reductase; Involved in the hydrocarbon hydroxylating system, which transfers electrons from NADH to rubredoxin reductase and then through rubredoxin to alkane 1 monooxygenase | 0.507 |
DR97_5856 | Pcd | DR97_5856 | DR97_917 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.964 |
DR97_5856 | PchA | DR97_5856 | DR97_2250 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.965 |
DR97_5856 | adhA | DR97_5856 | DR97_2804 | annotation not available | annotation not available | 0.886 |
DR97_5856 | adhC | DR97_5856 | DR97_4310 | annotation not available | S-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily | 0.874 |
DR97_5856 | alkB1 | DR97_5856 | DR97_5595 | annotation not available | Alkane 1-monooxygenase 1; Catalyzes the hydroxylation of n-alkanes in the presence of a NADH-rubredoxin reductase and rubredoxin. It preferably hydroxylases C16-C24 hydrocarbons | 0.900 |
Pcd | DR97_5856 | DR97_917 | DR97_5856 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | annotation not available | 0.964 |
Pcd | PchA | DR97_917 | DR97_2250 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.822 |
Pcd | adhA | DR97_917 | DR97_2804 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | annotation not available | 0.939 |
Pcd | adhC | DR97_917 | DR97_4310 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | S-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily | 0.921 |
Pcd | alkB1 | DR97_917 | DR97_5595 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | Alkane 1-monooxygenase 1; Catalyzes the hydroxylation of n-alkanes in the presence of a NADH-rubredoxin reductase and rubredoxin. It preferably hydroxylases C16-C24 hydrocarbons | 0.901 |
PchA | DR97_5856 | DR97_2250 | DR97_5856 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | annotation not available | 0.965 |
PchA | Pcd | DR97_2250 | DR97_917 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.822 |
PchA | adhA | DR97_2250 | DR97_2804 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | annotation not available | 0.950 |
PchA | adhC | DR97_2250 | DR97_4310 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | S-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily | 0.921 |
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