STRINGSTRING
cupA1 protein (Pseudomonas aeruginosa) - STRING interaction network
"cupA1" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cupA1annotation not available (160 aa)    
Predicted Functional Partners:
cupA3
Usher CupA3; papC N-terminal domain protein (872 aa)
 
 
  0.996
cupA2
Fimbrial chaperone protein; Pili assembly chaperone PapD, C-terminal domain protein (220 aa)
 
 
  0.994
cupA5
Pili assembly chaperone PapD, C-terminal domain protein (215 aa)
 
 
  0.993
cupA4
annotation not available (453 aa)
 
   
  0.980
cupB3
papC N-terminal domain protein (822 aa)
 
 
 
  0.967
cupC3
Usher CupC3; papC N-terminal domain protein (839 aa)
 
 
 
  0.956
DR97_3467
Pili assembly chaperone PapD, C-terminal domain protein (222 aa)
 
 
 
  0.872
cupB2
Chaperone protein EcpD; Pili assembly chaperone PapD, C-terminal domain protein (248 aa)
 
 
 
  0.856
cupC2
Chaperone protein EcpD; Pili assembly chaperone PapD, C-terminal domain protein (237 aa)
 
 
 
  0.848
ecpD_4
Chaperone protein EcpD; Pili assembly chaperone PapD, C-terminal domain protein (246 aa)
 
 
 
  0.848
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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