Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2331 | DR97_5745 | DR97_2331 | DR97_5745 | annotation not available | Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family | 0.923 |
DR97_2331 | acsA1 | DR97_2331 | DR97_1056 | annotation not available | Acetyl-coa synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA | 0.941 |
DR97_2331 | acsA2 | DR97_2331 | DR97_2076 | annotation not available | Acetyl-coa synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA | 0.941 |
DR97_2331 | pauA | DR97_2331 | DR97_928 | annotation not available | annotation not available | 0.902 |
DR97_2331 | ppsA | DR97_2331 | DR97_116 | annotation not available | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate | 0.831 |
DR97_5745 | DR97_2331 | DR97_5745 | DR97_2331 | Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family | annotation not available | 0.923 |
DR97_5745 | MaeB | DR97_5745 | DR97_2401 | Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family | annotation not available | 0.918 |
DR97_5745 | acsA1 | DR97_5745 | DR97_1056 | Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family | Acetyl-coa synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA | 0.918 |
DR97_5745 | acsA2 | DR97_5745 | DR97_2076 | Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family | Acetyl-coa synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA | 0.918 |
DR97_5745 | ilvN | DR97_5745 | DR97_2037 | Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family | Acetolactate synthase 3 regulatory subunit; Acolac_sm: acetolactate synthase, small subunit | 0.975 |
DR97_5745 | ldhA | DR97_5745 | DR97_1012 | Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family | D-isomer specific 2-hydroxyacid dehydrogenase, nad binding domain protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family | 0.919 |
DR97_5745 | lldA | DR97_5745 | DR97_6050 | Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family | annotation not available | 0.927 |
DR97_5745 | lldD | DR97_5745 | DR97_2115 | Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family | L-lactate dehydrogenase (cytochrome); Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain | 0.927 |
DR97_5745 | pauA | DR97_5745 | DR97_928 | Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family | annotation not available | 0.935 |
DR97_5745 | ppsA | DR97_5745 | DR97_116 | Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate | 0.930 |
MaeB | DR97_5745 | DR97_2401 | DR97_5745 | annotation not available | Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family | 0.918 |
MaeB | ilvN | DR97_2401 | DR97_2037 | annotation not available | Acetolactate synthase 3 regulatory subunit; Acolac_sm: acetolactate synthase, small subunit | 0.822 |
MaeB | ldhA | DR97_2401 | DR97_1012 | annotation not available | D-isomer specific 2-hydroxyacid dehydrogenase, nad binding domain protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family | 0.910 |
MaeB | lldA | DR97_2401 | DR97_6050 | annotation not available | annotation not available | 0.912 |
MaeB | lldD | DR97_2401 | DR97_2115 | annotation not available | L-lactate dehydrogenase (cytochrome); Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain | 0.913 |
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