Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AmrB | AmrR | DR97_5829 | DR97_5827 | 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 family protein | annotation not available | 0.952 |
AmrB | DR97_5828 | DR97_5829 | DR97_5828 | 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 family protein | Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.999 |
AmrB | DR97_5830 | DR97_5829 | DR97_5830 | 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 family protein | annotation not available | 0.845 |
AmrB | oprC | DR97_5829 | DR97_4079 | 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 family protein | Iron complex outermembrane recepter protein; Putative copper transport outer membrane porin OprC; tonB-copper: TonB-dependent copper receptor | 0.493 |
AmrB | oprJ | DR97_5829 | DR97_1903 | 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 family protein | Outer membrane protein, multidrug efflux system; Channel-forming component of a multidrug resistance efflux pump | 0.974 |
AmrR | AmrB | DR97_5827 | DR97_5829 | annotation not available | 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 family protein | 0.952 |
AmrR | DR97_5826 | DR97_5827 | DR97_5826 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.483 |
AmrR | DR97_5828 | DR97_5827 | DR97_5828 | annotation not available | Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.689 |
AmrR | DR97_5830 | DR97_5827 | DR97_5830 | annotation not available | annotation not available | 0.535 |
AmrR | DR97_645 | DR97_5827 | DR97_645 | annotation not available | annotation not available | 0.488 |
AmrR | EstB | DR97_5827 | DR97_4007 | annotation not available | annotation not available | 0.732 |
AmrR | mexR | DR97_5827 | DR97_3392 | annotation not available | Marr family transcriptional regulator, repressor of the mexab-oprm multidrug resistance operon; Repressor of the mexAB-oprM multidrug resistance operon. Also represses its own expression. Many variants lead to increased expression of the mexAB-oprM operon | 0.707 |
AmrR | oprC | DR97_5827 | DR97_4079 | annotation not available | Iron complex outermembrane recepter protein; Putative copper transport outer membrane porin OprC; tonB-copper: TonB-dependent copper receptor | 0.845 |
AmrR | oprJ | DR97_5827 | DR97_1903 | annotation not available | Outer membrane protein, multidrug efflux system; Channel-forming component of a multidrug resistance efflux pump | 0.530 |
AmrR | rumA | DR97_5827 | DR97_1006 | annotation not available | 23S rRNA (uracil1939-C5)-methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA | 0.491 |
DR97_5826 | AmrR | DR97_5826 | DR97_5827 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.483 |
DR97_5828 | AmrB | DR97_5828 | DR97_5829 | Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 family protein | 0.999 |
DR97_5828 | AmrR | DR97_5828 | DR97_5827 | Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | annotation not available | 0.689 |
DR97_5828 | DR97_5830 | DR97_5828 | DR97_5830 | Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | annotation not available | 0.806 |
DR97_5828 | oprJ | DR97_5828 | DR97_1903 | Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | Outer membrane protein, multidrug efflux system; Channel-forming component of a multidrug resistance efflux pump | 0.889 |
page 1 of 2