STRINGSTRING
gnyR protein (Pseudomonas aeruginosa) - STRING interaction network
"gnyR" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gnyRannotation not available (134 aa)    
Predicted Functional Partners:
IVD1
Isovaleryl-CoA dehydrogenase 1, mitochondrial; acyl-CoA dehydrogenase, N-terminal domain protein (387 aa)
 
   
  0.966
HMGCL
annotation not available (300 aa)
 
     
  0.946
gnyB
annotation not available (535 aa)
 
   
  0.938
Mccc1
annotation not available (655 aa)
         
  0.923
liuC
annotation not available (265 aa)
   
   
  0.876
atuA
Uncharacterized protein (600 aa)
           
  0.756
amiR
annotation not available (196 aa)
           
  0.554
DR97_5831
annotation not available (309 aa)
              0.534
pbrR2
cadR-PbrR- Cd(II)/Pb(II)-responsive transcriptional regulator (132 aa)
   
          0.496
psrA
annotation not available (233 aa)
   
     
  0.474
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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