Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1917 | DR97_5871 | DR97_1917 | DR97_5871 | Uncharacterized protein; GTP-binding protein | annotation not available | 0.436 |
DR97_5871 | DR97_1917 | DR97_5871 | DR97_1917 | annotation not available | Uncharacterized protein; GTP-binding protein | 0.436 |
DR97_5871 | agmR | DR97_5871 | DR97_5870 | annotation not available | Bacterial regulatory s, luxr family protein; Positive activator for glycerol metabolism | 0.847 |
DR97_5871 | pheT | DR97_5871 | DR97_5223 | annotation not available | Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily | 0.405 |
agmR | DR97_5871 | DR97_5870 | DR97_5871 | Bacterial regulatory s, luxr family protein; Positive activator for glycerol metabolism | annotation not available | 0.847 |
pheT | DR97_5871 | DR97_5223 | DR97_5871 | Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily | annotation not available | 0.405 |