Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1560 | DR97_4617 | DR97_1560 | DR97_4617 | annotation not available | Lipid a ethanolaminephosphotransferase; Phosphoethanolamine transferase EptA | 0.779 |
DR97_1560 | DR97_5876 | DR97_1560 | DR97_5876 | annotation not available | Lipid a ethanolaminephosphotransferase; Uncharacterized protein | 0.859 |
DR97_1560 | arnT | DR97_1560 | DR97_4386 | annotation not available | Dolichyl-phosphate-mannose-mannosyltransferase family protein; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides | 0.464 |
DR97_1560 | dgkA | DR97_1560 | DR97_4336 | annotation not available | Prokaryotic diacylglycerol kinase family protein; Recycling of diacylglycerol produced during the turnover of membrane phospholipid | 0.543 |
DR97_1560 | pmrA | DR97_1560 | DR97_2120 | annotation not available | annotation not available | 0.402 |
DR97_2563 | DR97_4617 | DR97_2563 | DR97_4617 | annotation not available | Lipid a ethanolaminephosphotransferase; Phosphoethanolamine transferase EptA | 0.911 |
DR97_2563 | DR97_5876 | DR97_2563 | DR97_5876 | annotation not available | Lipid a ethanolaminephosphotransferase; Uncharacterized protein | 0.911 |
DR97_2563 | arnT | DR97_2563 | DR97_4386 | annotation not available | Dolichyl-phosphate-mannose-mannosyltransferase family protein; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides | 0.916 |
DR97_2563 | lpxO1 | DR97_2563 | DR97_1691 | annotation not available | annotation not available | 0.912 |
DR97_2563 | lpxO2 | DR97_2563 | DR97_1003 | annotation not available | annotation not available | 0.912 |
DR97_3759 | DR97_4617 | DR97_3759 | DR97_4617 | annotation not available | Lipid a ethanolaminephosphotransferase; Phosphoethanolamine transferase EptA | 0.476 |
DR97_3759 | DR97_5876 | DR97_3759 | DR97_5876 | annotation not available | Lipid a ethanolaminephosphotransferase; Uncharacterized protein | 0.476 |
DR97_3759 | dgkA | DR97_3759 | DR97_4336 | annotation not available | Prokaryotic diacylglycerol kinase family protein; Recycling of diacylglycerol produced during the turnover of membrane phospholipid | 0.648 |
DR97_3759 | pmrA | DR97_3759 | DR97_2120 | annotation not available | annotation not available | 0.993 |
DR97_4617 | DR97_1560 | DR97_4617 | DR97_1560 | Lipid a ethanolaminephosphotransferase; Phosphoethanolamine transferase EptA | annotation not available | 0.779 |
DR97_4617 | DR97_2563 | DR97_4617 | DR97_2563 | Lipid a ethanolaminephosphotransferase; Phosphoethanolamine transferase EptA | annotation not available | 0.911 |
DR97_4617 | DR97_3759 | DR97_4617 | DR97_3759 | Lipid a ethanolaminephosphotransferase; Phosphoethanolamine transferase EptA | annotation not available | 0.476 |
DR97_4617 | DR97_5876 | DR97_4617 | DR97_5876 | Lipid a ethanolaminephosphotransferase; Phosphoethanolamine transferase EptA | Lipid a ethanolaminephosphotransferase; Uncharacterized protein | 0.810 |
DR97_4617 | arnT | DR97_4617 | DR97_4386 | Lipid a ethanolaminephosphotransferase; Phosphoethanolamine transferase EptA | Dolichyl-phosphate-mannose-mannosyltransferase family protein; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides | 0.991 |
DR97_4617 | dgkA | DR97_4617 | DR97_4336 | Lipid a ethanolaminephosphotransferase; Phosphoethanolamine transferase EptA | Prokaryotic diacylglycerol kinase family protein; Recycling of diacylglycerol produced during the turnover of membrane phospholipid | 0.867 |
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