Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_4677 | DR97_5603 | DR97_4677 | DR97_5603 | Putative EAL domain/GGDEF domain-containing protein; GGDEF: diguanylate cyclase domain protein | annotation not available | 0.761 |
DR97_4677 | DR97_589 | DR97_4677 | DR97_589 | Putative EAL domain/GGDEF domain-containing protein; GGDEF: diguanylate cyclase domain protein | annotation not available | 0.993 |
DR97_4677 | fimX | DR97_4677 | DR97_2312 | Putative EAL domain/GGDEF domain-containing protein; GGDEF: diguanylate cyclase domain protein | GGDEF: diguanylate cyclase domain protein | 0.842 |
DR97_4677 | lapD | DR97_4677 | DR97_590 | Putative EAL domain/GGDEF domain-containing protein; GGDEF: diguanylate cyclase domain protein | annotation not available | 0.851 |
DR97_5603 | DR97_4677 | DR97_5603 | DR97_4677 | annotation not available | Putative EAL domain/GGDEF domain-containing protein; GGDEF: diguanylate cyclase domain protein | 0.761 |
DR97_5603 | DR97_589 | DR97_5603 | DR97_589 | annotation not available | annotation not available | 0.993 |
DR97_5603 | fimX | DR97_5603 | DR97_2312 | annotation not available | GGDEF: diguanylate cyclase domain protein | 0.829 |
DR97_5603 | lapD | DR97_5603 | DR97_590 | annotation not available | annotation not available | 0.622 |
DR97_587 | DR97_588 | DR97_587 | DR97_588 | Putative rnd efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family | Putative rnd efflux membrane fusion protein precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.989 |
DR97_587 | DR97_589 | DR97_587 | DR97_589 | Putative rnd efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family | annotation not available | 0.679 |
DR97_587 | DR97_5970 | DR97_587 | DR97_5970 | Putative rnd efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family | type_I_hlyD: type I secretion membrane fusion , HlyD family protein | 0.430 |
DR97_587 | OpmL | DR97_587 | DR97_5972 | Putative rnd efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family | annotation not available | 0.469 |
DR97_587 | lapD | DR97_587 | DR97_590 | Putative rnd efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family | annotation not available | 0.653 |
DR97_588 | DR97_587 | DR97_588 | DR97_587 | Putative rnd efflux membrane fusion protein precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | Putative rnd efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family | 0.989 |
DR97_588 | DR97_589 | DR97_588 | DR97_589 | Putative rnd efflux membrane fusion protein precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | annotation not available | 0.634 |
DR97_588 | OpmL | DR97_588 | DR97_5972 | Putative rnd efflux membrane fusion protein precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | annotation not available | 0.490 |
DR97_588 | lapD | DR97_588 | DR97_590 | Putative rnd efflux membrane fusion protein precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | annotation not available | 0.611 |
DR97_589 | DR97_4677 | DR97_589 | DR97_4677 | annotation not available | Putative EAL domain/GGDEF domain-containing protein; GGDEF: diguanylate cyclase domain protein | 0.993 |
DR97_589 | DR97_5603 | DR97_589 | DR97_5603 | annotation not available | annotation not available | 0.993 |
DR97_589 | DR97_587 | DR97_589 | DR97_587 | annotation not available | Putative rnd efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family | 0.679 |
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