STRINGSTRING
purR protein (Pseudomonas aeruginosa) - STRING interaction network
"purR" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
purRannotation not available (337 aa)    
Predicted Functional Partners:
rbsC
annotation not available (332 aa)
 
   
  0.974
rbsB
annotation not available (319 aa)
 
 
  0.957
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway (308 aa)
   
  0.954
rbsA3
annotation not available (510 aa)
 
   
  0.951
fruI
Phosphotransferase system transporter enzyme I, FruI; PTS_I_fam- phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family (956 aa)
     
 
  0.870
ytnA
annotation not available (471 aa)
      
   
  0.866
nagF
PTS_I_fam- phosphoenolpyruvate-protein phosphotransferase (842 aa)
     
 
  0.863
DR97_532
Transcriptional regulator; deoR C terminal sensor domain protein (258 aa)
    
 
 
  0.773
codB
annotation not available (416 aa)
      
   
  0.743
DR97_2453
annotation not available (480 aa)
            
  0.718
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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