STRINGSTRING
rbsA3 protein (Pseudomonas aeruginosa) - STRING interaction network
"rbsA3" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsA3annotation not available (510 aa)    
Predicted Functional Partners:
rbsC
annotation not available (332 aa)
 
  0.999
rbsB
annotation not available (319 aa)
  0.998
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway (308 aa)
 
   
  0.957
purR
annotation not available (337 aa)
 
   
  0.951
pfuA
tonB-siderophor- TonB-dependent siderophore receptor family protein (732 aa)
           
  0.853
nuh
annotation not available (350 aa)
   
   
  0.769
morA
Motility regulator; GGDEF- diguanylate cyclase domain protein (1415 aa)
           
  0.750
DR97_3094
annotation not available (365 aa)
     
  0.591
DR97_3095
annotation not available (308 aa)
          0.581
dsdA
Probable D-serine dehydratase; D_Ser_am_lyase- D-serine ammonia-lyase; Belongs to the serine/threonine dehydratase family. DsdA subfamily (448 aa)
           
  0.553
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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