Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CirA | CobN | DR97_5923 | DR97_5922 | annotation not available | annotation not available | 0.951 |
CirA | DR97_5919 | DR97_5923 | DR97_5919 | annotation not available | Ribosomal protein s12 methylthiotransferase accessory factor; Uncharacterized protein | 0.610 |
CirA | DR97_5920 | DR97_5923 | DR97_5920 | annotation not available | Hypothetical protein; DUF2149 domain-containing protein | 0.961 |
CirA | DR97_5921 | DR97_5923 | DR97_5921 | annotation not available | Hypothetical protein; Biopolymer transporter ExbD | 0.974 |
CirA | metE | DR97_5923 | DR97_5918 | annotation not available | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation | 0.418 |
CobN | CirA | DR97_5922 | DR97_5923 | annotation not available | annotation not available | 0.951 |
CobN | DR97_5919 | DR97_5922 | DR97_5919 | annotation not available | Ribosomal protein s12 methylthiotransferase accessory factor; Uncharacterized protein | 0.610 |
CobN | DR97_5920 | DR97_5922 | DR97_5920 | annotation not available | Hypothetical protein; DUF2149 domain-containing protein | 0.973 |
CobN | DR97_5921 | DR97_5922 | DR97_5921 | annotation not available | Hypothetical protein; Biopolymer transporter ExbD | 0.983 |
CobN | metE | DR97_5922 | DR97_5918 | annotation not available | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation | 0.415 |
DR97_3759 | DR97_5919 | DR97_3759 | DR97_5919 | annotation not available | Ribosomal protein s12 methylthiotransferase accessory factor; Uncharacterized protein | 0.640 |
DR97_5919 | CirA | DR97_5919 | DR97_5923 | Ribosomal protein s12 methylthiotransferase accessory factor; Uncharacterized protein | annotation not available | 0.610 |
DR97_5919 | CobN | DR97_5919 | DR97_5922 | Ribosomal protein s12 methylthiotransferase accessory factor; Uncharacterized protein | annotation not available | 0.610 |
DR97_5919 | DR97_3759 | DR97_5919 | DR97_3759 | Ribosomal protein s12 methylthiotransferase accessory factor; Uncharacterized protein | annotation not available | 0.640 |
DR97_5919 | DR97_5920 | DR97_5919 | DR97_5920 | Ribosomal protein s12 methylthiotransferase accessory factor; Uncharacterized protein | Hypothetical protein; DUF2149 domain-containing protein | 0.610 |
DR97_5919 | DR97_5921 | DR97_5919 | DR97_5921 | Ribosomal protein s12 methylthiotransferase accessory factor; Uncharacterized protein | Hypothetical protein; Biopolymer transporter ExbD | 0.610 |
DR97_5919 | metE | DR97_5919 | DR97_5918 | Ribosomal protein s12 methylthiotransferase accessory factor; Uncharacterized protein | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation | 0.608 |
DR97_5919 | moeB | DR97_5919 | DR97_1972 | Ribosomal protein s12 methylthiotransferase accessory factor; Uncharacterized protein | annotation not available | 0.571 |
DR97_5919 | rimO | DR97_5919 | DR97_1024 | Ribosomal protein s12 methylthiotransferase accessory factor; Uncharacterized protein | Ribosomal protein s12 methylthiotransferase rimo; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 | 0.569 |
DR97_5919 | thiI | DR97_5919 | DR97_2472 | Ribosomal protein s12 methylthiotransferase accessory factor; Uncharacterized protein | Thiamine biosynthesis protein thii; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS | 0.568 |
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