DR97_5919 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

DR97_5919

Uncharacterized protein (756 aa)

Predicted Functional Partners:

DR97_3759

0.643

cirA

0.631

DR97_5922

0.610

DR97_5921

0.610

DR97_5920

0.610

metE

0.563

moeB

0.513

DR97_5029

0.469

DR97_5924

0.449

DR97_284

0.410

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_284	DR97_5919	DR97_284	DR97_5919	annotation not available	Uncharacterized protein	0.410
DR97_3759	DR97_5919	DR97_3759	DR97_5919	annotation not available	Uncharacterized protein	0.643
DR97_5029	DR97_5919	DR97_5029	DR97_5919	annotation not available	Uncharacterized protein	0.469
DR97_5919	DR97_284	DR97_5919	DR97_284	Uncharacterized protein	annotation not available	0.410
DR97_5919	DR97_3759	DR97_5919	DR97_3759	Uncharacterized protein	annotation not available	0.643
DR97_5919	DR97_5029	DR97_5919	DR97_5029	Uncharacterized protein	annotation not available	0.469
DR97_5919	DR97_5920	DR97_5919	DR97_5920	Uncharacterized protein	DUF2149 domain-containing protein	0.610
DR97_5919	DR97_5921	DR97_5919	DR97_5921	Uncharacterized protein	Biopolymer transporter ExbD	0.610
DR97_5919	DR97_5922	DR97_5919	DR97_5922	Uncharacterized protein	annotation not available	0.610
DR97_5919	DR97_5924	DR97_5919	DR97_5924	Uncharacterized protein	annotation not available	0.449
DR97_5919	cirA	DR97_5919	DR97_5923	Uncharacterized protein	annotation not available	0.631
DR97_5919	metE	DR97_5919	DR97_5918	Uncharacterized protein	met_syn_B12ind- 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	0.563
DR97_5919	moeB	DR97_5919	DR97_1972	Uncharacterized protein	annotation not available	0.513
DR97_5920	DR97_5919	DR97_5920	DR97_5919	DUF2149 domain-containing protein	Uncharacterized protein	0.610
DR97_5920	DR97_5921	DR97_5920	DR97_5921	DUF2149 domain-containing protein	Biopolymer transporter ExbD	0.987
DR97_5920	DR97_5922	DR97_5920	DR97_5922	DUF2149 domain-containing protein	annotation not available	0.973
DR97_5920	DR97_5924	DR97_5920	DR97_5924	DUF2149 domain-containing protein	annotation not available	0.642
DR97_5920	cirA	DR97_5920	DR97_5923	DUF2149 domain-containing protein	annotation not available	0.961
DR97_5921	DR97_5919	DR97_5921	DR97_5919	Biopolymer transporter ExbD	Uncharacterized protein	0.610
DR97_5921	DR97_5920	DR97_5921	DR97_5920	Biopolymer transporter ExbD	DUF2149 domain-containing protein	0.987

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