Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR97_6281 | treA | DR97_6281 | DR97_6017 | Uncharacterized protein; Stress-induced bacterial acidophilic repeat motif protein | Trehalase family protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system | 0.658 |
| SndH | treA | DR97_6019 | DR97_6017 | annotation not available | Trehalase family protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system | 0.504 |
| glk | pgi | DR97_4743 | DR97_2075 | Belongs to the bacterial glucokinase family | annotation not available | 0.984 |
| glk | treA | DR97_4743 | DR97_6017 | Belongs to the bacterial glucokinase family | Trehalase family protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system | 0.914 |
| ibpA | treA | DR97_4807 | DR97_6017 | hsp20/alpha crystallin family protein; Belongs to the small heat shock protein (HSP20) family | Trehalase family protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system | 0.474 |
| pgi | glk | DR97_2075 | DR97_4743 | annotation not available | Belongs to the bacterial glucokinase family | 0.984 |
| pgi | treA | DR97_2075 | DR97_6017 | annotation not available | Trehalase family protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system | 0.728 |
| pgi | treZ | DR97_2075 | DR97_6262 | annotation not available | trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase | 0.612 |
| rhlG | treA | DR97_4535 | DR97_6017 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase; Required for the synthesis of the beta-hydroxy acid moiety of rhamnolipids | Trehalase family protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system | 0.480 |
| soxA | treA | DR97_2795 | DR97_6017 | Sarcosine oxidase, subunit alpha; Belongs to the GcvT family | Trehalase family protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system | 0.465 |
| treA | DR97_6281 | DR97_6017 | DR97_6281 | Trehalase family protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system | Uncharacterized protein; Stress-induced bacterial acidophilic repeat motif protein | 0.658 |
| treA | SndH | DR97_6017 | DR97_6019 | Trehalase family protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system | annotation not available | 0.504 |
| treA | glk | DR97_6017 | DR97_4743 | Trehalase family protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system | Belongs to the bacterial glucokinase family | 0.914 |
| treA | ibpA | DR97_6017 | DR97_4807 | Trehalase family protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system | hsp20/alpha crystallin family protein; Belongs to the small heat shock protein (HSP20) family | 0.474 |
| treA | pgi | DR97_6017 | DR97_2075 | Trehalase family protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system | annotation not available | 0.728 |
| treA | rhlG | DR97_6017 | DR97_4535 | Trehalase family protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system | Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase; Required for the synthesis of the beta-hydroxy acid moiety of rhamnolipids | 0.480 |
| treA | soxA | DR97_6017 | DR97_2795 | Trehalase family protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system | Sarcosine oxidase, subunit alpha; Belongs to the GcvT family | 0.465 |
| treA | treS | DR97_6017 | DR97_6274 | Trehalase family protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system | Maltose alpha-d-glucosyltransferase / alpha-amylase; treS_nterm: trehalose synthase | 0.988 |
| treA | treY | DR97_6017 | DR97_6264 | Trehalase family protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system | trehalose_TreY: malto-oligosyltrehalose synthase | 0.785 |
| treA | treZ | DR97_6017 | DR97_6262 | Trehalase family protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system | trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase | 0.909 |
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