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rhbA protein (Pseudomonas aeruginosa) - STRING interaction network
"rhbA" - Diaminobutyrate-2-oxoglutarateaminotransferase in Pseudomonas aeruginosa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhbADiaminobutyrate-2-oxoglutarateaminotransferase; Dat- 2,4-diaminobutyrate 4-transaminase family protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (469 aa)    
Predicted Functional Partners:
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family (370 aa)
         
  0.942
pvdL
Uncharacterized protein; D-ala-DACP-lig- D-alanine--poly(phosphoribitol) ligase, subunit 1 (4342 aa)
   
  0.918
DR97_6021
annotation not available (72 aa)
 
   
  0.910
hom
annotation not available (434 aa)
   
 
    0.903
DR97_6022
annotation not available (254 aa)
 
        0.856
pvdN
annotation not available (427 aa)
   
   
  0.842
pvdO
annotation not available (284 aa)
   
   
  0.841
pvdA
annotation not available (443 aa)
 
     
  0.810
pvdI
Peptide synthase; D-ala-DACP-lig- D-alanine--poly(phosphoribitol) ligase, subunit 1 (4135 aa)
     
  0.810
pvdG
annotation not available (254 aa)
 
   
  0.745
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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