Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_6034 | DR97_6046 | DR97_6034 | DR97_6046 | FpvA; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.877 |
DR97_6034 | ExbD | DR97_6034 | DR97_4957 | FpvA; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.865 |
DR97_6034 | PvdF | DR97_6034 | DR97_6036 | FpvA; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.884 |
DR97_6034 | eta | DR97_6034 | DR97_786 | FpvA; tonB-siderophor: TonB-dependent siderophore receptor family protein | Exotoxin a precursor; An NAD-dependent ADP-ribosyltransferase (ADPRT). Catalyzes the transfer of the ADP ribosyl moiety of oxidized NAD (NAD(+)) onto eukaryotic elongation factor 2 (eEF-2) thus arresting protein synthesis. Has an LD(50) of 65 ng/ml against the human lung epithelial cell line C38 | 0.843 |
DR97_6034 | exbD | DR97_6034 | DR97_3156 | FpvA; tonB-siderophor: TonB-dependent siderophore receptor family protein | Biopolymer transport exbd/tolr family protein; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates | 0.825 |
DR97_6034 | opmQ | DR97_6034 | DR97_6041 | FpvA; tonB-siderophor: TonB-dependent siderophore receptor family protein | Uncharacterized protein; outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | 0.894 |
DR97_6034 | pchR | DR97_6034 | DR97_3684 | FpvA; tonB-siderophor: TonB-dependent siderophore receptor family protein | Arac family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors; Positive activator of the genes for pyochelin and ferripyochelin receptors | 0.734 |
DR97_6034 | pfeA | DR97_6034 | DR97_5271 | FpvA; tonB-siderophor: TonB-dependent siderophore receptor family protein | Tonb-dependent siderophore receptor family protein; Specific receptor for the siderophore ferric enterobactin | 0.864 |
DR97_6034 | pvdS | DR97_6034 | DR97_6007 | FpvA; tonB-siderophor: TonB-dependent siderophore receptor family protein | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.895 |
DR97_6034 | tonB | DR97_6034 | DR97_2910 | FpvA; tonB-siderophor: TonB-dependent siderophore receptor family protein | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (By similarity) | 0.990 |
DR97_6046 | DR97_6034 | DR97_6046 | DR97_6034 | annotation not available | FpvA; tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.877 |
DR97_6046 | PvdF | DR97_6046 | DR97_6036 | annotation not available | annotation not available | 0.896 |
DR97_6046 | eta | DR97_6046 | DR97_786 | annotation not available | Exotoxin a precursor; An NAD-dependent ADP-ribosyltransferase (ADPRT). Catalyzes the transfer of the ADP ribosyl moiety of oxidized NAD (NAD(+)) onto eukaryotic elongation factor 2 (eEF-2) thus arresting protein synthesis. Has an LD(50) of 65 ng/ml against the human lung epithelial cell line C38 | 0.682 |
DR97_6046 | opmQ | DR97_6046 | DR97_6041 | annotation not available | Uncharacterized protein; outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | 0.670 |
DR97_6046 | pvdS | DR97_6046 | DR97_6007 | annotation not available | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.879 |
DR97_6046 | tonB | DR97_6046 | DR97_2910 | annotation not available | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (By similarity) | 0.427 |
ExbD | DR97_6034 | DR97_4957 | DR97_6034 | annotation not available | FpvA; tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.865 |
ExbD | pfeA | DR97_4957 | DR97_5271 | annotation not available | Tonb-dependent siderophore receptor family protein; Specific receptor for the siderophore ferric enterobactin | 0.403 |
ExbD | tonB | DR97_4957 | DR97_2910 | annotation not available | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (By similarity) | 0.938 |
PvdF | DR97_6034 | DR97_6036 | DR97_6034 | annotation not available | FpvA; tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.884 |
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