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DR97_6040 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_6040" - PvdD/PvdJ in Pseudomonas aeruginosa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_6040PvdD/PvdJ; TAT_signal_seq- Tat (twin-arginine translocation) pathway signal sequence domain protein (548 aa)    
Predicted Functional Partners:
pvdN
annotation not available (427 aa)
 
     
  0.882
DR97_6039
annotation not available (448 aa)
 
     
  0.866
pvdO
annotation not available (284 aa)
 
     
  0.858
pvdL
Uncharacterized protein; D-ala-DACP-lig- D-alanine--poly(phosphoribitol) ligase, subunit 1 (4342 aa)
    
     
  0.750
algK
annotation not available (475 aa)
    
          0.699
algG
annotation not available (543 aa)
    
          0.697
algE
annotation not available (490 aa)
    
          0.693
algL
Alginate lyase; Catalyzes the depolymerization of alginate by cleaving the beta-1,4 glycosidic bond between two adjacent sugar residues via a beta-elimination mechanism (367 aa)
    
          0.677
algF
annotation not available (213 aa)
    
          0.657
DR97_5206
DUF3509 domain-containing protein (77 aa)
    
          0.644
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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