STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_607annotation not available (460 aa)    
Predicted Functional Partners:
DR97_606
Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family
  
    0.855
mblac2
annotation not available
  
  
 0.710
DR97_605
Putative sodium:solute symport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family
     
 0.602
phr
Fad binding domain of dna photolyase family protein; Belongs to the DNA photolyase family
   
   0.501
DR97_1968
annotation not available
   
    0.465
dadA2
D-amino-acid dehydrogenase; Oxidative deamination of D-amino acids
   
    0.450
glcA
Glycolate permease glca; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate
 
  
 0.442
DR97_604
Permease for cytosine/purine, uracil, thiamine, allantoin family protein; Belongs to the purine-cytosine permease (2.A.39) family
  
    0.440
lldD
L-lactate dehydrogenase (cytochrome); Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain
  
 
 0.423
lldA
annotation not available
  
 
 0.423
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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