STRINGSTRING
zraR3 protein (Pseudomonas aeruginosa) - STRING interaction network
"zraR3" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zraR3annotation not available (361 aa)    
Predicted Functional Partners:
rpoN
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (497 aa)
 
     
  0.792
DR97_6120
annotation not available (193 aa)
   
        0.786
metQ1
annotation not available (259 aa)
   
        0.751
DR97_5433
Putative periplasmic aliphatic sulfonate-binding protein; ssuA_fam- ABC transporter, substrate-binding , aliphatic sulfonates family protein (319 aa)
 
 
        0.750
DR97_3246
DUF2292 domain-containing protein (60 aa)
     
        0.750
DR97_6074
Uncharacterized protein (88 aa)
   
        0.727
DR97_3759
annotation not available (1417 aa)
     
 
  0.651
exbB1
annotation not available (239 aa)
   
        0.632
bexR
annotation not available (304 aa)
           
  0.630
iscS3
annotation not available (393 aa)
     
        0.621
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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