Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_12 | DR97_6078 | DR97_12 | DR97_6078 | annotation not available | annotation not available | 0.564 |
DR97_12 | DR97_6085 | DR97_12 | DR97_6085 | annotation not available | Putative monooxygenase, DszC family; sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family | 0.420 |
DR97_12 | MsuC | DR97_12 | DR97_6077 | annotation not available | Putative FMNH2-dependent monooxygenase; acyl-CoA dehydrogenase, C-terminal domain protein | 0.589 |
DR97_12 | msuD | DR97_12 | DR97_6076 | annotation not available | Alkanesulfonate monooxygenase, fmnh(2)-dependent; Catalyzes the desulfonation of aliphatic sulfonates. Shows highest activity with methanesulfonate | 0.565 |
DR97_12 | msuE | DR97_12 | DR97_6075 | annotation not available | Nadh-dependent fmn reductase; FMN_reduc_MsuE: FMN reductase | 0.520 |
DR97_3759 | DR97_6078 | DR97_3759 | DR97_6078 | annotation not available | annotation not available | 0.558 |
DR97_3759 | bvgS | DR97_3759 | DR97_3920 | annotation not available | annotation not available | 0.914 |
DR97_3759 | rpoN | DR97_3759 | DR97_1641 | annotation not available | Rna polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released | 0.722 |
DR97_6078 | DR97_12 | DR97_6078 | DR97_12 | annotation not available | annotation not available | 0.564 |
DR97_6078 | DR97_3759 | DR97_6078 | DR97_3759 | annotation not available | annotation not available | 0.558 |
DR97_6078 | DR97_6085 | DR97_6078 | DR97_6085 | annotation not available | Putative monooxygenase, DszC family; sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family | 0.580 |
DR97_6078 | MsuC | DR97_6078 | DR97_6077 | annotation not available | Putative FMNH2-dependent monooxygenase; acyl-CoA dehydrogenase, C-terminal domain protein | 0.969 |
DR97_6078 | bexR | DR97_6078 | DR97_6000 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.683 |
DR97_6078 | bvgS | DR97_6078 | DR97_3920 | annotation not available | annotation not available | 0.563 |
DR97_6078 | msuD | DR97_6078 | DR97_6076 | annotation not available | Alkanesulfonate monooxygenase, fmnh(2)-dependent; Catalyzes the desulfonation of aliphatic sulfonates. Shows highest activity with methanesulfonate | 0.936 |
DR97_6078 | msuE | DR97_6078 | DR97_6075 | annotation not available | Nadh-dependent fmn reductase; FMN_reduc_MsuE: FMN reductase | 0.939 |
DR97_6078 | rpoN | DR97_6078 | DR97_1641 | annotation not available | Rna polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released | 0.799 |
DR97_6078 | sfnG | DR97_6078 | DR97_3912 | annotation not available | LLM_DMSO2_sfnG: dimethyl sulfone monooxygenase SfnG | 0.875 |
DR97_6085 | DR97_12 | DR97_6085 | DR97_12 | Putative monooxygenase, DszC family; sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family | annotation not available | 0.420 |
DR97_6085 | DR97_6078 | DR97_6085 | DR97_6078 | Putative monooxygenase, DszC family; sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family | annotation not available | 0.580 |
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