STRINGSTRING
sdsB5 protein (Pseudomonas aeruginosa) - STRING interaction network
"sdsB5" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdsB5annotation not available (303 aa)    
Predicted Functional Partners:
DR97_6097
annotation not available (789 aa)
 
   
  0.854
DR97_6100
annotation not available (538 aa)
 
        0.701
DR97_6096
annotation not available (446 aa)
 
        0.681
atsR
annotation not available (353 aa)
   
     
  0.656
atsB
annotation not available (538 aa)
   
     
  0.631
DR97_4094
annotation not available (302 aa)
   
          0.577
phnR
Putative transcriptional regulator; phn_lysR- aminoethylphosphonate catabolism associated LysR transcriptional regulator family protein (286 aa)
   
          0.576
DR97_3148
annotation not available (790 aa)
   
     
  0.575
DR97_3164
annotation not available (297 aa)
   
          0.541
DR97_5738
annotation not available (317 aa)
   
          0.484
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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