cmpC protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

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[Homology]

Score

cmpC

annotation not available (278 aa)

Predicted Functional Partners:

srpL

0.987

cmpB

0.978

DR97_6102

0.961

DR97_6101

0.917

DR97_6099

0.664

atsB

0.606

tauC

0.605

nasS

0.597

ssuC1

0.590

DR97_6138

0.570

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_6099	DR97_6101	DR97_6099	DR97_6101	annotation not available	Alkyl hydroperoxide reductase AhpD; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	0.832
DR97_6099	DR97_6102	DR97_6099	DR97_6102	annotation not available	Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein	0.823
DR97_6099	cmpB	DR97_6099	DR97_6105	annotation not available	annotation not available	0.667
DR97_6099	cmpC	DR97_6099	DR97_6103	annotation not available	annotation not available	0.664
DR97_6099	srpL	DR97_6099	DR97_6104	annotation not available	annotation not available	0.796
DR97_6101	DR97_6099	DR97_6101	DR97_6099	Alkyl hydroperoxide reductase AhpD; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	annotation not available	0.832
DR97_6101	DR97_6102	DR97_6101	DR97_6102	Alkyl hydroperoxide reductase AhpD; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein	0.947
DR97_6101	cmpB	DR97_6101	DR97_6105	Alkyl hydroperoxide reductase AhpD; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	annotation not available	0.896
DR97_6101	cmpC	DR97_6101	DR97_6103	Alkyl hydroperoxide reductase AhpD; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	annotation not available	0.917
DR97_6101	srpL	DR97_6101	DR97_6104	Alkyl hydroperoxide reductase AhpD; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	annotation not available	0.949
DR97_6102	DR97_6099	DR97_6102	DR97_6099	Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein	annotation not available	0.823
DR97_6102	DR97_6101	DR97_6102	DR97_6101	Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein	Alkyl hydroperoxide reductase AhpD; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	0.947
DR97_6102	cmpB	DR97_6102	DR97_6105	Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein	annotation not available	0.972
DR97_6102	cmpC	DR97_6102	DR97_6103	Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein	annotation not available	0.961
DR97_6102	srpL	DR97_6102	DR97_6104	Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein	annotation not available	0.985
DR97_6138	cmpC	DR97_6138	DR97_6103	annotation not available	annotation not available	0.570
DR97_6138	srpL	DR97_6138	DR97_6104	annotation not available	annotation not available	0.431
atsB	cmpC	DR97_3141	DR97_6103	annotation not available	annotation not available	0.606
atsB	srpL	DR97_3141	DR97_6104	annotation not available	annotation not available	0.540
atsB	ssuC1	DR97_3141	DR97_4473	annotation not available	annotation not available	0.852

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