STRINGSTRING
gntR protein (Pseudomonas aeruginosa) - STRING interaction network
"gntR" - annotation not available in Pseudomonas aeruginosa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gntRannotation not available (343 aa)    
Predicted Functional Partners:
nagF
PTS_I_fam- phosphoenolpyruvate-protein phosphotransferase (842 aa)
     
 
  0.863
fruI
Phosphotransferase system transporter enzyme I, FruI; PTS_I_fam- phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family (956 aa)
     
 
  0.861
gntK
Gluconokinase; Therm_gnt_kin- carbohydrate kinase, thermoresistant glucokinase family protein (173 aa)
 
 
 
  0.830
arsR
annotation not available (116 aa)
       
 
  0.809
iclR
annotation not available (259 aa)
   
     
  0.793
marR
annotation not available (156 aa)
           
  0.780
fruR
annotation not available (329 aa)
   
   
  0.755
DR97_5509
annotation not available (140 aa)
           
  0.752
DR97_1801
Mercuric resistance operon regulatory protein; Mediates the mercuric-dependent induction of mercury resistance operon. In the absence of mercury MerR represses transcription by binding tightly to the mer operator region; when mercury is present the dimeric complex binds a single ion and becomes a potent transcriptional activator, while remaining bound to the mer site (144 aa)
           
  0.752
gnuT
gntP- transporter, gluconate-H+ symporter family protein (450 aa)
 
     
  0.641
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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