Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3180 | ambA | DR97_3180 | DR97_6126 | Dihydrodipicolinate synthetase family protein; Belongs to the DapA family | annotation not available | 0.853 |
DR97_3180 | rtcR | DR97_3180 | DR97_1885 | Dihydrodipicolinate synthetase family protein; Belongs to the DapA family | annotation not available | 0.852 |
DR97_3942 | UreJ | DR97_3942 | DR97_2245 | annotation not available | annotation not available | 0.682 |
DR97_3942 | ambA | DR97_3942 | DR97_6126 | annotation not available | annotation not available | 0.733 |
DR97_3942 | nirD | DR97_3942 | DR97_106 | annotation not available | nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit | 0.615 |
DR97_3942 | ureF | DR97_3942 | DR97_2243 | annotation not available | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter | 0.483 |
DR97_3942 | urtC | DR97_3942 | DR97_2211 | annotation not available | Urea abc transporter, permease protein urtc; Belongs to the binding-protein-dependent transport system permease family | 0.736 |
DR97_3942 | urtD | DR97_3942 | DR97_2212 | annotation not available | Putative atp-binding component of abc transporter; Cobalt import ATP-binding protein CbiO; urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD | 0.672 |
UreJ | DR97_3942 | DR97_2245 | DR97_3942 | annotation not available | annotation not available | 0.682 |
UreJ | ambA | DR97_2245 | DR97_6126 | annotation not available | annotation not available | 0.849 |
UreJ | nirD | DR97_2245 | DR97_106 | annotation not available | nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit | 0.683 |
UreJ | ureC | DR97_2245 | DR97_2219 | annotation not available | Urease, alpha subunit; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family | 0.791 |
UreJ | ureF | DR97_2245 | DR97_2243 | annotation not available | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter | 0.958 |
UreJ | urtC | DR97_2245 | DR97_2211 | annotation not available | Urea abc transporter, permease protein urtc; Belongs to the binding-protein-dependent transport system permease family | 0.892 |
UreJ | urtD | DR97_2245 | DR97_2212 | annotation not available | Putative atp-binding component of abc transporter; Cobalt import ATP-binding protein CbiO; urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD | 0.891 |
ambA | DR97_3180 | DR97_6126 | DR97_3180 | annotation not available | Dihydrodipicolinate synthetase family protein; Belongs to the DapA family | 0.853 |
ambA | DR97_3942 | DR97_6126 | DR97_3942 | annotation not available | annotation not available | 0.733 |
ambA | UreJ | DR97_6126 | DR97_2245 | annotation not available | annotation not available | 0.849 |
ambA | lgrD | DR97_6126 | DR97_6127 | annotation not available | Linear gramicidin synthase subunit d domain protein; Belongs to the ATP-dependent AMP-binding enzyme family | 0.579 |
ambA | nirD | DR97_6126 | DR97_106 | annotation not available | nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit | 0.832 |
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