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STRINGSTRING
ambC protein (Pseudomonas aeruginosa) - STRING interaction network
"ambC" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ambCannotation not available (362 aa)    
Predicted Functional Partners:
lgrD
annotation not available (1249 aa)
   
  0.952
DR97_6131
Uncharacterized protein; fkbM_fam- methyltransferase, FkbM family domain protein (1381 aa)
   
  0.952
ambD
annotation not available (339 aa)
 
   
0.937
DR97_6130
annotation not available (744 aa)
     
  0.882
DR97_6021
annotation not available (72 aa)
 
   
  0.688
pvdG
annotation not available (254 aa)
 
        0.661
DR97_6032
PvdJ(2); D-ala-DACP-lig- D-alanine--poly(phosphoribitol) ligase, subunit 1 (4992 aa)
     
  0.654
pvdI
Peptide synthase; D-ala-DACP-lig- D-alanine--poly(phosphoribitol) ligase, subunit 1 (4135 aa)
     
  0.650
DR97_4600
AA-adenyl-dom- amino acid adenylation domain protein (2352 aa)
     
  0.633
DR97_6022
annotation not available (254 aa)
 
        0.627
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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