Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3768 | GltF | DR97_3768 | DR97_4747 | annotation not available | annotation not available | 0.670 |
DR97_3768 | GltG | DR97_3768 | DR97_4748 | annotation not available | annotation not available | 0.742 |
DR97_3768 | KguK | DR97_3768 | DR97_6172 | annotation not available | annotation not available | 0.583 |
DR97_3768 | KguT | DR97_3768 | DR97_6171 | annotation not available | annotation not available | 0.681 |
DR97_3768 | OprB | DR97_3768 | DR97_6142 | annotation not available | annotation not available | 0.401 |
DR97_3768 | oprB | DR97_3768 | DR97_4750 | annotation not available | Glucose/carbohydrate outer membrane porin; Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of glucose, mannitol, fructose and glycerol (sugars able to support the growth of P.aeruginosa). Facilitates glucose diffusion across the outer membrane | 0.457 |
GltF | DR97_3768 | DR97_4747 | DR97_3768 | annotation not available | annotation not available | 0.670 |
GltF | GltG | DR97_4747 | DR97_4748 | annotation not available | annotation not available | 0.999 |
GltF | KguT | DR97_4747 | DR97_6171 | annotation not available | annotation not available | 0.696 |
GltF | oprB | DR97_4747 | DR97_4750 | annotation not available | Glucose/carbohydrate outer membrane porin; Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of glucose, mannitol, fructose and glycerol (sugars able to support the growth of P.aeruginosa). Facilitates glucose diffusion across the outer membrane | 0.726 |
GltF | ptxS | DR97_4747 | DR97_6174 | annotation not available | annotation not available | 0.521 |
GltG | DR97_3768 | DR97_4748 | DR97_3768 | annotation not available | annotation not available | 0.742 |
GltG | GltF | DR97_4748 | DR97_4747 | annotation not available | annotation not available | 0.999 |
GltG | KguT | DR97_4748 | DR97_6171 | annotation not available | annotation not available | 0.851 |
GltG | OprB | DR97_4748 | DR97_6142 | annotation not available | annotation not available | 0.429 |
GltG | gltR | DR97_4748 | DR97_4744 | annotation not available | Two-component system, ompr family, response regulator; Transcriptional regulatory , C terminal family protein | 0.400 |
GltG | oprB | DR97_4748 | DR97_4750 | annotation not available | Glucose/carbohydrate outer membrane porin; Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of glucose, mannitol, fructose and glycerol (sugars able to support the growth of P.aeruginosa). Facilitates glucose diffusion across the outer membrane | 0.791 |
GltG | ptxS | DR97_4748 | DR97_6174 | annotation not available | annotation not available | 0.463 |
KguD | KguE | DR97_6170 | DR97_6173 | D-isomer specific 2-hydroxyacid dehydrogenase, nad binding domain protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family | annotation not available | 0.986 |
KguD | KguK | DR97_6170 | DR97_6172 | D-isomer specific 2-hydroxyacid dehydrogenase, nad binding domain protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family | annotation not available | 0.998 |
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