Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cyp23 | DR97_4599 | DR97_4596 | DR97_4599 | Belongs to the cytochrome P450 family | annotation not available | 0.957 |
Cyp23 | DR97_6176 | DR97_4596 | DR97_6176 | Belongs to the cytochrome P450 family | annotation not available | 0.581 |
Cyp23 | phzS | DR97_4596 | DR97_3694 | Belongs to the cytochrome P450 family | 5-methylphenazine-1-carboxylate 1-monooxygenase; Involved in the biosynthesis of pyocyanine, a blue-pigmented phenazine derivative, which plays a role in virulence. Catalyzes the oxidative decarboxylation of 5-methylphenazine-1-carboxylate (5-methyl- PCA) to pyocyanine. Can also act on phenazine-1-carboxylate (PCA), converting it into 1-hydroxyphenazine (1-HP). However, PCA is a poor substrate | 0.557 |
Cyp23 | pobA | DR97_4596 | DR97_3204 | Belongs to the cytochrome P450 family | P-hydroxybenzoate 3-monooxygenase; Catalyzes the incorporation of an atom of dioxygen into p- hydroxybenzoate (p-OHB) to form 3,4-dihydroxybenzoate (3,4DOHB). The reaction occurs in two parts: reduction of the flavin adenine dinucleotide (FAD) in the enzyme by reduced nicotinamide adenine dinucleotide phosphate (NADPH) in response to binding p-hydroxybenzoate to the enzyme and oxidation of reduced FAD with oxygen to form a hydroperoxide, which then oxygenates p-hydroxybenzoate | 0.430 |
DR97_4599 | Cyp23 | DR97_4599 | DR97_4596 | annotation not available | Belongs to the cytochrome P450 family | 0.957 |
DR97_4599 | DR97_6176 | DR97_4599 | DR97_6176 | annotation not available | annotation not available | 0.814 |
DR97_4599 | hpaB | DR97_4599 | DR97_3776 | annotation not available | 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component; Oxygenase component of the 4-hydroxyphenylacetate (HPA) 3- hydroxylase. Catalyzes the hydroxylation of 4-hydroxyphenylacetate to form 3,4-dihydroxyphenylacetate, using FADH(-) provided by the reductase component HpaC to activate oxygen. To a lesser extent, can also use reduced FMN . In vitro, has hydroxylation activity toward tyrosol and various cinnamic acid derivatives, catalyzing the hydroxylation of p-coumaric acid, caffeic acid, ferulic acid, and coniferaldehyde | 0.853 |
DR97_6176 | Cyp23 | DR97_6176 | DR97_4596 | annotation not available | Belongs to the cytochrome P450 family | 0.581 |
DR97_6176 | DR97_4599 | DR97_6176 | DR97_4599 | annotation not available | annotation not available | 0.814 |
DR97_6176 | DR97_6177 | DR97_6176 | DR97_6177 | annotation not available | annotation not available | 0.839 |
DR97_6176 | DR97_6179 | DR97_6176 | DR97_6179 | annotation not available | annotation not available | 0.603 |
DR97_6176 | DR97_6180 | DR97_6176 | DR97_6180 | annotation not available | annotation not available | 0.764 |
DR97_6176 | DR97_6181 | DR97_6176 | DR97_6181 | annotation not available | annotation not available | 0.566 |
DR97_6176 | hpaB | DR97_6176 | DR97_3776 | annotation not available | 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component; Oxygenase component of the 4-hydroxyphenylacetate (HPA) 3- hydroxylase. Catalyzes the hydroxylation of 4-hydroxyphenylacetate to form 3,4-dihydroxyphenylacetate, using FADH(-) provided by the reductase component HpaC to activate oxygen. To a lesser extent, can also use reduced FMN . In vitro, has hydroxylation activity toward tyrosol and various cinnamic acid derivatives, catalyzing the hydroxylation of p-coumaric acid, caffeic acid, ferulic acid, and coniferaldehyde | 0.693 |
DR97_6176 | pheA | DR97_6176 | DR97_4770 | annotation not available | Chorismate mutase / prephenate dehydratase; Catalyzes the Claisen rearrangement of chorismate to prephenate and the decarboxylation/dehydration of prephenate to phenylpyruvate | 0.605 |
DR97_6176 | phzS | DR97_6176 | DR97_3694 | annotation not available | 5-methylphenazine-1-carboxylate 1-monooxygenase; Involved in the biosynthesis of pyocyanine, a blue-pigmented phenazine derivative, which plays a role in virulence. Catalyzes the oxidative decarboxylation of 5-methylphenazine-1-carboxylate (5-methyl- PCA) to pyocyanine. Can also act on phenazine-1-carboxylate (PCA), converting it into 1-hydroxyphenazine (1-HP). However, PCA is a poor substrate | 0.609 |
DR97_6176 | pobA | DR97_6176 | DR97_3204 | annotation not available | P-hydroxybenzoate 3-monooxygenase; Catalyzes the incorporation of an atom of dioxygen into p- hydroxybenzoate (p-OHB) to form 3,4-dihydroxybenzoate (3,4DOHB). The reaction occurs in two parts: reduction of the flavin adenine dinucleotide (FAD) in the enzyme by reduced nicotinamide adenine dinucleotide phosphate (NADPH) in response to binding p-hydroxybenzoate to the enzyme and oxidation of reduced FAD with oxygen to form a hydroperoxide, which then oxygenates p-hydroxybenzoate | 0.765 |
DR97_6177 | DR97_6176 | DR97_6177 | DR97_6176 | annotation not available | annotation not available | 0.839 |
DR97_6177 | DR97_6180 | DR97_6177 | DR97_6180 | annotation not available | annotation not available | 0.726 |
DR97_6177 | DR97_6181 | DR97_6177 | DR97_6181 | annotation not available | annotation not available | 0.575 |
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