Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR97_2431 | DR97_6191 | DR97_2431 | DR97_6191 | Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | annotation not available | 0.673 |
| DR97_6191 | DR97_2431 | DR97_6191 | DR97_2431 | annotation not available | Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | 0.673 |
| DR97_6191 | DR97_6192 | DR97_6191 | DR97_6192 | annotation not available | annotation not available | 0.836 |
| DR97_6191 | gmd | DR97_6191 | DR97_2832 | annotation not available | Gdpmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose | 0.579 |
| DR97_6191 | ilvA1 | DR97_6191 | DR97_3296 | annotation not available | Threonine ammonia-lyase, biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA | 0.618 |
| DR97_6191 | ilvA2 | DR97_6191 | DR97_468 | annotation not available | Threonine ammonia-lyase, biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA | 0.617 |
| DR97_6191 | rmd | DR97_6191 | DR97_2833 | annotation not available | 3-beta hydroxysteroid dehydrogenase/isomerase family protein; Reductase that catalyzes the conversion of GDP-6-deoxy-D- mannose to GDP-4-dehydro-6-deoxy-D-mannose (GDP-D-rhamnose) | 0.688 |
| DR97_6191 | wbpW | DR97_6191 | DR97_2831 | annotation not available | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family | 0.681 |
| DR97_6191 | wbpX | DR97_6191 | DR97_2828 | annotation not available | annotation not available | 0.846 |
| DR97_6191 | wbpY | DR97_6191 | DR97_2827 | annotation not available | annotation not available | 0.737 |
| DR97_6191 | wbpZ | DR97_6191 | DR97_2826 | annotation not available | annotation not available | 0.690 |
| DR97_6192 | DR97_6191 | DR97_6192 | DR97_6191 | annotation not available | annotation not available | 0.836 |
| gmd | DR97_6191 | DR97_2832 | DR97_6191 | Gdpmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose | annotation not available | 0.579 |
| gmd | rmd | DR97_2832 | DR97_2833 | Gdpmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose | 3-beta hydroxysteroid dehydrogenase/isomerase family protein; Reductase that catalyzes the conversion of GDP-6-deoxy-D- mannose to GDP-4-dehydro-6-deoxy-D-mannose (GDP-D-rhamnose) | 0.995 |
| gmd | wbpW | DR97_2832 | DR97_2831 | Gdpmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family | 0.999 |
| gmd | wbpX | DR97_2832 | DR97_2828 | Gdpmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose | annotation not available | 0.995 |
| gmd | wbpY | DR97_2832 | DR97_2827 | Gdpmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose | annotation not available | 0.995 |
| gmd | wbpZ | DR97_2832 | DR97_2826 | Gdpmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose | annotation not available | 0.993 |
| ilvA1 | DR97_6191 | DR97_3296 | DR97_6191 | Threonine ammonia-lyase, biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA | annotation not available | 0.618 |
| ilvA1 | ilvA2 | DR97_3296 | DR97_468 | Threonine ammonia-lyase, biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA | Threonine ammonia-lyase, biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA | 0.802 |
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STRING Database User Survey
