Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2228 | DR97_6199 | DR97_2228 | DR97_6199 | Hypothetical protein; Rho termination factor, N-terminal domain protein | annotation not available | 0.579 |
DR97_2350 | DR97_6199 | DR97_2350 | DR97_6199 | asn_synth_AEB: asparagine synthase | annotation not available | 0.900 |
DR97_2350 | lysC | DR97_2350 | DR97_1039 | asn_synth_AEB: asparagine synthase | Aspartate kinase, monofunctional class; Belongs to the aspartokinase family | 0.473 |
DR97_4782 | DR97_6199 | DR97_4782 | DR97_6199 | Lipopolysaccharide B-band O-antigen biosynthesis protein; asn_synth_AEB: asparagine synthase | annotation not available | 0.900 |
DR97_4782 | lysC | DR97_4782 | DR97_1039 | Lipopolysaccharide B-band O-antigen biosynthesis protein; asn_synth_AEB: asparagine synthase | Aspartate kinase, monofunctional class; Belongs to the aspartokinase family | 0.482 |
DR97_6199 | DR97_2228 | DR97_6199 | DR97_2228 | annotation not available | Hypothetical protein; Rho termination factor, N-terminal domain protein | 0.579 |
DR97_6199 | DR97_2350 | DR97_6199 | DR97_2350 | annotation not available | asn_synth_AEB: asparagine synthase | 0.900 |
DR97_6199 | DR97_4782 | DR97_6199 | DR97_4782 | annotation not available | Lipopolysaccharide B-band O-antigen biosynthesis protein; asn_synth_AEB: asparagine synthase | 0.900 |
DR97_6199 | DR97_6200 | DR97_6199 | DR97_6200 | annotation not available | annotation not available | 0.667 |
DR97_6199 | aspA | DR97_6199 | DR97_2806 | annotation not available | Aspartate ammonia-lyase; Belongs to the class-II fumarase/aspartase family. Aspartase subfamily | 0.908 |
DR97_6199 | eutB | DR97_6199 | DR97_3843 | annotation not available | annotation not available | 0.671 |
DR97_6199 | eutC | DR97_6199 | DR97_3842 | annotation not available | Ethanolamine ammonia-lyase light chain family protein; Belongs to the EutC family | 0.575 |
DR97_6199 | lysC | DR97_6199 | DR97_1039 | annotation not available | Aspartate kinase, monofunctional class; Belongs to the aspartokinase family | 0.958 |
DR97_6199 | ppc | DR97_6199 | DR97_4190 | annotation not available | Phosphoenolpyruvate carboxylase family protein; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle | 0.901 |
DR97_6199 | prr | DR97_6199 | DR97_6198 | annotation not available | annotation not available | 0.782 |
DR97_6200 | DR97_6199 | DR97_6200 | DR97_6199 | annotation not available | annotation not available | 0.667 |
DR97_6200 | prr | DR97_6200 | DR97_6198 | annotation not available | annotation not available | 0.579 |
aspA | DR97_6199 | DR97_2806 | DR97_6199 | Aspartate ammonia-lyase; Belongs to the class-II fumarase/aspartase family. Aspartase subfamily | annotation not available | 0.908 |
aspA | lysC | DR97_2806 | DR97_1039 | Aspartate ammonia-lyase; Belongs to the class-II fumarase/aspartase family. Aspartase subfamily | Aspartate kinase, monofunctional class; Belongs to the aspartokinase family | 0.808 |
eutB | DR97_6199 | DR97_3843 | DR97_6199 | annotation not available | annotation not available | 0.671 |
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