Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_6215 | DR97_6218 | DR97_6215 | DR97_6218 | Hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family | Pyridoxal phosphate biosynthetic pdxa family protein; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) | 0.751 |
DR97_6215 | DR97_6219 | DR97_6215 | DR97_6219 | Hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family | annotation not available | 0.814 |
DR97_6215 | DR97_6220 | DR97_6215 | DR97_6220 | Hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family | annotation not available | 0.582 |
DR97_6215 | DR97_6221 | DR97_6215 | DR97_6221 | Hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family | annotation not available | 0.473 |
DR97_6215 | DR97_6222 | DR97_6215 | DR97_6222 | Hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family | annotation not available | 0.417 |
DR97_6215 | DR97_6223 | DR97_6215 | DR97_6223 | Hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family | annotation not available | 0.447 |
DR97_6218 | DR97_6215 | DR97_6218 | DR97_6215 | Pyridoxal phosphate biosynthetic pdxa family protein; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) | Hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family | 0.751 |
DR97_6218 | DR97_6219 | DR97_6218 | DR97_6219 | Pyridoxal phosphate biosynthetic pdxa family protein; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) | annotation not available | 0.932 |
DR97_6218 | DR97_6220 | DR97_6218 | DR97_6220 | Pyridoxal phosphate biosynthetic pdxa family protein; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) | annotation not available | 0.909 |
DR97_6218 | DR97_6221 | DR97_6218 | DR97_6221 | Pyridoxal phosphate biosynthetic pdxa family protein; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) | annotation not available | 0.749 |
DR97_6218 | DR97_6222 | DR97_6218 | DR97_6222 | Pyridoxal phosphate biosynthetic pdxa family protein; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) | annotation not available | 0.651 |
DR97_6218 | DR97_6223 | DR97_6218 | DR97_6223 | Pyridoxal phosphate biosynthetic pdxa family protein; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) | annotation not available | 0.714 |
DR97_6218 | pdxJ | DR97_6218 | DR97_1210 | Pyridoxal phosphate biosynthetic pdxa family protein; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) | Pyridoxal phosphate biosynthetic protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate | 0.967 |
DR97_6218 | ribB | DR97_6218 | DR97_3813 | Pyridoxal phosphate biosynthetic pdxa family protein; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) | Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/gtp cyclohydrolase ii protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate | 0.581 |
DR97_6218 | ribD | DR97_6218 | DR97_3811 | Pyridoxal phosphate biosynthetic pdxa family protein; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) | Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate | 0.612 |
DR97_6218 | serC | DR97_6218 | DR97_4769 | Pyridoxal phosphate biosynthetic pdxa family protein; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine | 0.911 |
DR97_6219 | DR97_6215 | DR97_6219 | DR97_6215 | annotation not available | Hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family | 0.814 |
DR97_6219 | DR97_6218 | DR97_6219 | DR97_6218 | annotation not available | Pyridoxal phosphate biosynthetic pdxa family protein; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) | 0.932 |
DR97_6219 | DR97_6220 | DR97_6219 | DR97_6220 | annotation not available | annotation not available | 0.958 |
DR97_6219 | DR97_6221 | DR97_6219 | DR97_6221 | annotation not available | annotation not available | 0.620 |
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