Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2053 | gltB | DR97_2053 | DR97_2391 | annotation not available | annotation not available | 0.464 |
DR97_2053 | hcnB | DR97_2053 | DR97_6236 | annotation not available | Pyridine nucleotide-disulfide oxidoreductase family protein; A three-component membrane-bound flavoenzyme that catalyzes the formation of hydrogen cyanide, a secondary metabolite, by transfer of electrons to a cyanide-resistant branch of the aerobic respiratory chain | 0.940 |
DR97_5245 | fdnG | DR97_5245 | DR97_2159 | Molybdopterin oxidoreductase fe4s4 domain protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | Formate dehydrogenase-o major subunit; formate-DH-alph: formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | 0.882 |
DR97_5245 | gltB | DR97_5245 | DR97_2391 | Molybdopterin oxidoreductase fe4s4 domain protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | annotation not available | 0.754 |
DR97_5245 | hcnA | DR97_5245 | DR97_6237 | Molybdopterin oxidoreductase fe4s4 domain protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | 2Fe-2S iron-sulfur cluster binding domain protein; A three-component membrane-bound flavoenzyme that catalyzes the formation of hydrogen cyanide, a secondary metabolite, by transfer of electrons to a cyanide-resistant branch of the aerobic respiratory chain | 0.602 |
DR97_5245 | hcnB | DR97_5245 | DR97_6236 | Molybdopterin oxidoreductase fe4s4 domain protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | Pyridine nucleotide-disulfide oxidoreductase family protein; A three-component membrane-bound flavoenzyme that catalyzes the formation of hydrogen cyanide, a secondary metabolite, by transfer of electrons to a cyanide-resistant branch of the aerobic respiratory chain | 0.713 |
DR97_669 | Ferredoxin | DR97_669 | DR97_670 | annotation not available | annotation not available | 0.994 |
DR97_669 | hcnA | DR97_669 | DR97_6237 | annotation not available | 2Fe-2S iron-sulfur cluster binding domain protein; A three-component membrane-bound flavoenzyme that catalyzes the formation of hydrogen cyanide, a secondary metabolite, by transfer of electrons to a cyanide-resistant branch of the aerobic respiratory chain | 0.701 |
DR97_669 | hcnB | DR97_669 | DR97_6236 | annotation not available | Pyridine nucleotide-disulfide oxidoreductase family protein; A three-component membrane-bound flavoenzyme that catalyzes the formation of hydrogen cyanide, a secondary metabolite, by transfer of electrons to a cyanide-resistant branch of the aerobic respiratory chain | 0.810 |
Ferredoxin | DR97_669 | DR97_670 | DR97_669 | annotation not available | annotation not available | 0.994 |
Ferredoxin | hcnB | DR97_670 | DR97_6236 | annotation not available | Pyridine nucleotide-disulfide oxidoreductase family protein; A three-component membrane-bound flavoenzyme that catalyzes the formation of hydrogen cyanide, a secondary metabolite, by transfer of electrons to a cyanide-resistant branch of the aerobic respiratory chain | 0.786 |
fdnG | DR97_5245 | DR97_2159 | DR97_5245 | Formate dehydrogenase-o major subunit; formate-DH-alph: formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | Molybdopterin oxidoreductase fe4s4 domain protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | 0.882 |
fdnG | gltB | DR97_2159 | DR97_2391 | Formate dehydrogenase-o major subunit; formate-DH-alph: formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | annotation not available | 0.754 |
fdnG | hcnA | DR97_2159 | DR97_6237 | Formate dehydrogenase-o major subunit; formate-DH-alph: formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | 2Fe-2S iron-sulfur cluster binding domain protein; A three-component membrane-bound flavoenzyme that catalyzes the formation of hydrogen cyanide, a secondary metabolite, by transfer of electrons to a cyanide-resistant branch of the aerobic respiratory chain | 0.602 |
fdnG | hcnB | DR97_2159 | DR97_6236 | Formate dehydrogenase-o major subunit; formate-DH-alph: formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | Pyridine nucleotide-disulfide oxidoreductase family protein; A three-component membrane-bound flavoenzyme that catalyzes the formation of hydrogen cyanide, a secondary metabolite, by transfer of electrons to a cyanide-resistant branch of the aerobic respiratory chain | 0.713 |
gltB | DR97_2053 | DR97_2391 | DR97_2053 | annotation not available | annotation not available | 0.464 |
gltB | DR97_5245 | DR97_2391 | DR97_5245 | annotation not available | Molybdopterin oxidoreductase fe4s4 domain protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | 0.754 |
gltB | fdnG | DR97_2391 | DR97_2159 | annotation not available | Formate dehydrogenase-o major subunit; formate-DH-alph: formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | 0.754 |
gltB | hcnB | DR97_2391 | DR97_6236 | annotation not available | Pyridine nucleotide-disulfide oxidoreductase family protein; A three-component membrane-bound flavoenzyme that catalyzes the formation of hydrogen cyanide, a secondary metabolite, by transfer of electrons to a cyanide-resistant branch of the aerobic respiratory chain | 0.800 |
gltB | nirD | DR97_2391 | DR97_106 | annotation not available | nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit | 0.464 |
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