STRINGSTRING
DR97_6239 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_6239" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_6239annotation not available (88 aa)    
Predicted Functional Partners:
nagE
PTS-II-BC-nag- PTS system, N-acetylglucosamine-specific IIBC component (570 aa)
 
   
  0.784
nagF
PTS_I_fam- phosphoenolpyruvate-protein phosphotransferase (842 aa)
 
   
  0.645
glgP
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (812 aa)
 
 
  0.628
treS
treS_nterm- trehalose synthase (1100 aa)
 
 
0.569
hcnC
annotation not available (417 aa)
         
  0.543
glgX
Glycogen operon protein GlgX homolog; glgX_debranch- glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family (716 aa)
 
   
  0.540
DR97_6236
annotation not available (464 aa)
   
   
  0.534
treY
trehalose_TreY- malto-oligosyltrehalose synthase (926 aa)
 
   
  0.532
hcnA
annotation not available (104 aa)
              0.529
treZ
trehalose_TreZ- malto-oligosyltrehalose trehalohydrolase (583 aa)
 
   
  0.487
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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