DR97_6249 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

DR97_6249

Uncharacterized protein (196 aa)

Predicted Functional Partners:

DR97_6250

0.832

DR97_1489

0.725

DR97_4656

0.722

DR97_3019

0.711

oprH

0.690

DR97_364

0.664

DR97_6248

0.657

DR97_1525

0.656

DR97_5

0.615

DR97_2835

0.601

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_1489	DR97_1525	DR97_1489	DR97_1525	TIGR00374 family protein	annotation not available	0.540
DR97_1489	DR97_2835	DR97_1489	DR97_2835	TIGR00374 family protein	annotation not available	0.537
DR97_1489	DR97_3019	DR97_1489	DR97_3019	TIGR00374 family protein	annotation not available	0.667
DR97_1489	DR97_4656	DR97_1489	DR97_4656	TIGR00374 family protein	Putative secreted protein	0.556
DR97_1489	DR97_5	DR97_1489	DR97_5	TIGR00374 family protein	Uncharacterized protein	0.496
DR97_1489	DR97_6249	DR97_1489	DR97_6249	TIGR00374 family protein	Uncharacterized protein	0.725
DR97_1525	DR97_1489	DR97_1525	DR97_1489	annotation not available	TIGR00374 family protein	0.540
DR97_1525	DR97_2835	DR97_1525	DR97_2835	annotation not available	annotation not available	0.498
DR97_1525	DR97_3019	DR97_1525	DR97_3019	annotation not available	annotation not available	0.743
DR97_1525	DR97_364	DR97_1525	DR97_364	annotation not available	Uncharacterized protein	0.467
DR97_1525	DR97_6249	DR97_1525	DR97_6249	annotation not available	Uncharacterized protein	0.656
DR97_1525	oprH	DR97_1525	DR97_756	annotation not available	PhoP/Q and low Mg2+ inducible outer membrane protein H1; OMP85_target: outer membrane insertion C-terminal signal domain protein	0.720
DR97_2835	DR97_1489	DR97_2835	DR97_1489	annotation not available	TIGR00374 family protein	0.537
DR97_2835	DR97_1525	DR97_2835	DR97_1525	annotation not available	annotation not available	0.498
DR97_2835	DR97_3019	DR97_2835	DR97_3019	annotation not available	annotation not available	0.438
DR97_2835	DR97_364	DR97_2835	DR97_364	annotation not available	Uncharacterized protein	0.721
DR97_2835	DR97_6249	DR97_2835	DR97_6249	annotation not available	Uncharacterized protein	0.601
DR97_3019	DR97_1489	DR97_3019	DR97_1489	annotation not available	TIGR00374 family protein	0.667
DR97_3019	DR97_1525	DR97_3019	DR97_1525	annotation not available	annotation not available	0.743
DR97_3019	DR97_2835	DR97_3019	DR97_2835	annotation not available	annotation not available	0.438

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