STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_6272Glycosyltransferase 2 family protein; Inner membrane protein YbhN (331 aa)    
Predicted Functional Partners:
clsB
Putative cardiolipin synthase ybho; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
 
  
 0.984
DR97_6270
annotation not available
 
    0.979
DR97_6268
annotation not available
  
    0.915
DR97_6269
Hypothetical protein; Uncharacterized protein
  
    0.912
DR97_6281
Uncharacterized protein; Stress-induced bacterial acidophilic repeat motif protein
 
     0.741
DR97_6267
annotation not available
  
    0.722
glgX
Glycogen debranching enzyme glgx; Belongs to the glycosyl hydrolase 13 family
 
    0.702
treY
trehalose_TreY: malto-oligosyltrehalose synthase
 
    0.661
DR97_6265
Conserved hypothetical protein
 
    0.646
treZ
trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase
 
    0.629
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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