Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3799 | DR97_4777 | DR97_3799 | DR97_4777 | annotation not available | UDP-glucose/GDP-mannose dehydrogenase-like protein; NDP-sugDHase: nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family | 0.545 |
DR97_3799 | DR97_632 | DR97_3799 | DR97_632 | annotation not available | annotation not available | 0.469 |
DR97_3799 | algD | DR97_3799 | DR97_4402 | annotation not available | Gdp-mannose 6-dehydrogenase; Catalyzes the oxidation of guanosine diphospho-D-mannose (GDP-D-mannose) to GDP-D-mannuronic acid, a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics | 0.711 |
DR97_4777 | DR97_3799 | DR97_4777 | DR97_3799 | UDP-glucose/GDP-mannose dehydrogenase-like protein; NDP-sugDHase: nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family | annotation not available | 0.545 |
DR97_4777 | DR97_632 | DR97_4777 | DR97_632 | UDP-glucose/GDP-mannose dehydrogenase-like protein; NDP-sugDHase: nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family | annotation not available | 0.547 |
DR97_4777 | DR97_638 | DR97_4777 | DR97_638 | UDP-glucose/GDP-mannose dehydrogenase-like protein; NDP-sugDHase: nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family | annotation not available | 0.852 |
DR97_4777 | wbgU | DR97_4777 | DR97_4778 | UDP-glucose/GDP-mannose dehydrogenase-like protein; NDP-sugDHase: nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family | annotation not available | 0.999 |
DR97_631 | DR97_632 | DR97_631 | DR97_632 | annotation not available | annotation not available | 0.819 |
DR97_632 | DR97_3799 | DR97_632 | DR97_3799 | annotation not available | annotation not available | 0.469 |
DR97_632 | DR97_4777 | DR97_632 | DR97_4777 | annotation not available | UDP-glucose/GDP-mannose dehydrogenase-like protein; NDP-sugDHase: nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family | 0.547 |
DR97_632 | DR97_631 | DR97_632 | DR97_631 | annotation not available | annotation not available | 0.819 |
DR97_632 | DR97_633 | DR97_632 | DR97_633 | annotation not available | annotation not available | 0.481 |
DR97_632 | DR97_638 | DR97_632 | DR97_638 | annotation not available | annotation not available | 0.565 |
DR97_632 | DR97_932 | DR97_632 | DR97_932 | annotation not available | annotation not available | 0.516 |
DR97_632 | algD | DR97_632 | DR97_4402 | annotation not available | Gdp-mannose 6-dehydrogenase; Catalyzes the oxidation of guanosine diphospho-D-mannose (GDP-D-mannose) to GDP-D-mannuronic acid, a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics | 0.468 |
DR97_632 | glgB | DR97_632 | DR97_6273 | annotation not available | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position | 0.470 |
DR97_632 | treZ | DR97_632 | DR97_6262 | annotation not available | trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase | 0.470 |
DR97_632 | wbgU | DR97_632 | DR97_4778 | annotation not available | annotation not available | 0.545 |
DR97_633 | DR97_632 | DR97_633 | DR97_632 | annotation not available | annotation not available | 0.481 |
DR97_633 | DR97_932 | DR97_633 | DR97_932 | annotation not available | annotation not available | 0.435 |
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