Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1760 | DR97_641 | DR97_1760 | DR97_641 | annotation not available | annotation not available | 0.816 |
DR97_1760 | HplS | DR97_1760 | DR97_5284 | annotation not available | annotation not available | 0.910 |
DR97_1760 | HplT | DR97_1760 | DR97_5285 | annotation not available | typeII_sec_gspG: type II secretion system protein G | 0.826 |
DR97_1760 | HxcT | DR97_1760 | DR97_1438 | annotation not available | General secretion pathway protein g; typeII_sec_gspG: type II secretion system protein G | 0.849 |
DR97_1760 | xcpT | DR97_1760 | DR97_4832 | annotation not available | Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane | 0.840 |
DR97_641 | DR97_1760 | DR97_641 | DR97_1760 | annotation not available | annotation not available | 0.816 |
DR97_641 | GspE | DR97_641 | DR97_2579 | annotation not available | General secretion pathway protein e; Type II secretion system (T2SS), E, N-terminal domain protein | 0.811 |
DR97_641 | HplR | DR97_641 | DR97_5283 | annotation not available | annotation not available | 0.869 |
DR97_641 | HplS | DR97_641 | DR97_5284 | annotation not available | annotation not available | 0.795 |
DR97_641 | HplT | DR97_641 | DR97_5285 | annotation not available | typeII_sec_gspG: type II secretion system protein G | 0.873 |
DR97_641 | HxcT | DR97_641 | DR97_1438 | annotation not available | General secretion pathway protein g; typeII_sec_gspG: type II secretion system protein G | 0.806 |
DR97_641 | hxcR | DR97_641 | DR97_1433 | annotation not available | Involved in a type II secretion system (T2SS) for the export of proteins. Probably required for the translocation of a variety of proteins across the outer membrane | 0.849 |
DR97_641 | pilB | DR97_641 | DR97_1707 | annotation not available | type_IV_pilB: type IV-A pilus assembly ATPase PilB | 0.835 |
DR97_641 | xcpR | DR97_641 | DR97_4830 | annotation not available | Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane | 0.835 |
DR97_641 | xcpT | DR97_641 | DR97_4832 | annotation not available | Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane | 0.795 |
GspE | DR97_641 | DR97_2579 | DR97_641 | General secretion pathway protein e; Type II secretion system (T2SS), E, N-terminal domain protein | annotation not available | 0.811 |
GspE | HplS | DR97_2579 | DR97_5284 | General secretion pathway protein e; Type II secretion system (T2SS), E, N-terminal domain protein | annotation not available | 0.923 |
GspE | HplT | DR97_2579 | DR97_5285 | General secretion pathway protein e; Type II secretion system (T2SS), E, N-terminal domain protein | typeII_sec_gspG: type II secretion system protein G | 0.978 |
GspE | HxcT | DR97_2579 | DR97_1438 | General secretion pathway protein e; Type II secretion system (T2SS), E, N-terminal domain protein | General secretion pathway protein g; typeII_sec_gspG: type II secretion system protein G | 0.978 |
GspE | hxcR | DR97_2579 | DR97_1433 | General secretion pathway protein e; Type II secretion system (T2SS), E, N-terminal domain protein | Involved in a type II secretion system (T2SS) for the export of proteins. Probably required for the translocation of a variety of proteins across the outer membrane | 0.818 |
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