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aprD3 protein (Pseudomonas aeruginosa) - STRING interaction network
"aprD3" - Alkaline protease secretion ATP-binding protein AprD in Pseudomonas aeruginosa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aprD3Alkaline protease secretion ATP-binding protein AprD; type_I_sec_PrtD- type I secretion system ATPase family protein (593 aa)    
Predicted Functional Partners:
aprE
Alkaline protease secretion protein AprE; type_I_hlyD- type I secretion membrane fusion , HlyD family protein (432 aa)
   
  0.997
aprF3
Alkaline protease secretion protein AprF; type_I_sec_TolC- type I secretion outer membrane , TolC family protein (481 aa)
   
  0.995
aprX
Uncharacterized protein (414 aa)
   
   
  0.976
aprA
annotation not available (479 aa)
 
   
  0.972
inh
annotation not available (131 aa)
 
   
  0.847
prtE
type_I_hlyD- type I secretion membrane fusion , HlyD family protein (443 aa)
   
  0.840
aprD1
Alkaline protease secretion ATP-binding protein AprD; type_I_sec_PrtD- type I secretion system ATPase family protein (596 aa)
   
 
 
0.809
aprF1
Alkaline protease secretion protein AprF; type_I_sec_TolC- type I secretion outer membrane , TolC family protein (451 aa)
     
  0.663
DR97_5970
type_I_hlyD- type I secretion membrane fusion , HlyD family protein (395 aa)
     
  0.530
hasA
annotation not available (205 aa)
   
   
  0.420
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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