STRINGSTRING
sprT protein (Pseudomonas aeruginosa) - STRING interaction network
"sprT" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sprTannotation not available (165 aa)    
Predicted Functional Partners:
sbcC
Nuclease sbcCD subunit C; recF/RecN/SMC N terminal domain protein (1211 aa)
         
  0.856
mazG
Nucleoside triphosphate pyrophosphohydrolase; mazG- MazG family protein (276 aa)
 
   
  0.820
DR97_4017
annotation not available (334 aa)
   
          0.730
DR97_1738
annotation not available (340 aa)
   
          0.729
yohC
annotation not available (199 aa)
              0.653
DR97_1583
RNA-binding protein (153 aa)
   
          0.592
DR97_4890
DUF469 domain-containing protein (114 aa)
   
          0.588
DR97_2640
Uncharacterized protein (91 aa)
   
          0.527
DR97_1948
Putative lipoprotein (195 aa)
   
          0.515
yccS
YCCS_YHJK- integral membrane , YccS/YhfK family protein (733 aa)
   
        0.504
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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