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napD protein (Pseudomonas aeruginosa) - STRING interaction network
"napD" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
napDannotation not available (109 aa)    
Predicted Functional Partners:
napC
Cytochrome c-type protein; napC_nirT- periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family protein (198 aa)
 
   
  0.996
napF
napF- ferredoxin-type protein NapF (163 aa)
 
   
  0.994
napB
Periplasmic nitrate reductase, electron transfer subunit; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family (163 aa)
 
   
  0.991
napA
Nitrate reductase; Catalytic subunit of the nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein NapC. Essential function for nitrate assimilation and may have a role in anaerobic metabolism (834 aa)
 
 
  0.989
napE
Putative membrane protein; nitrate_rd_NapE- periplasmic nitrate reductase, NapE protein (55 aa)
 
        0.969
DR97_107
annotation not available (908 aa)
   
 
  0.812
preA
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA; pyrD_sub1_fam- dihydroorotate dehydrogenase family domain protein (424 aa)
   
   
  0.809
fdoG
formate-DH-alph- formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family (813 aa)
   
 
  0.705
DR97_5245
annotation not available (769 aa)
   
 
  0.666
snr1
annotation not available (467 aa)
           
  0.622
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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