Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1986 | DR97_775 | DR97_1986 | DR97_775 | annotation not available | annotation not available | 0.485 |
DR97_1986 | hrpA | DR97_1986 | DR97_4633 | annotation not available | Putative atp-dependent helicase; DEAH_box_HrpA: ATP-dependent helicase HrpA | 0.776 |
DR97_1986 | hrpB | DR97_1986 | DR97_3905 | annotation not available | DEAH_box_HrpB: ATP-dependent helicase HrpB | 0.776 |
DR97_775 | DR97_1986 | DR97_775 | DR97_1986 | annotation not available | annotation not available | 0.485 |
DR97_775 | YegD | DR97_775 | DR97_2224 | annotation not available | annotation not available | 0.493 |
DR97_775 | betC | DR97_775 | DR97_2984 | annotation not available | Chol_sulfatase: choline-sulfatase | 0.485 |
DR97_775 | deaD | DR97_775 | DR97_5101 | annotation not available | Dead/deah box helicase family protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation | 0.504 |
DR97_775 | dnaK | DR97_775 | DR97_2105 | annotation not available | Molecular chaperone dnak; Acts as a chaperone | 0.658 |
DR97_775 | hrpA | DR97_775 | DR97_4633 | annotation not available | Putative atp-dependent helicase; DEAH_box_HrpA: ATP-dependent helicase HrpA | 0.613 |
DR97_775 | hrpB | DR97_775 | DR97_3905 | annotation not available | DEAH_box_HrpB: ATP-dependent helicase HrpB | 0.613 |
DR97_775 | hscA | DR97_775 | DR97_4059 | annotation not available | Fe-s protein assembly chaperone hsca; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB (By similarity) | 0.493 |
DR97_775 | hupB | DR97_775 | DR97_76 | annotation not available | Dna-binding protein hu-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions | 0.521 |
DR97_775 | typA | DR97_775 | DR97_2471 | annotation not available | typA_BipA: GTP-binding protein TypA/BipA | 0.512 |
YegD | DR97_775 | DR97_2224 | DR97_775 | annotation not available | annotation not available | 0.493 |
YegD | hrpA | DR97_2224 | DR97_4633 | annotation not available | Putative atp-dependent helicase; DEAH_box_HrpA: ATP-dependent helicase HrpA | 0.587 |
YegD | hrpB | DR97_2224 | DR97_3905 | annotation not available | DEAH_box_HrpB: ATP-dependent helicase HrpB | 0.597 |
betC | DR97_775 | DR97_2984 | DR97_775 | Chol_sulfatase: choline-sulfatase | annotation not available | 0.485 |
deaD | DR97_775 | DR97_5101 | DR97_775 | Dead/deah box helicase family protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation | annotation not available | 0.504 |
deaD | hrpA | DR97_5101 | DR97_4633 | Dead/deah box helicase family protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation | Putative atp-dependent helicase; DEAH_box_HrpA: ATP-dependent helicase HrpA | 0.791 |
deaD | hrpB | DR97_5101 | DR97_3905 | Dead/deah box helicase family protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation | DEAH_box_HrpB: ATP-dependent helicase HrpB | 0.785 |
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