STRINGSTRING
DR97_788 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_788" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_788annotation not available (393 aa)    
Predicted Functional Partners:
DR97_787
annotation not available (496 aa)
   
      0.641
nagF
PTS_I_fam- phosphoenolpyruvate-protein phosphotransferase (842 aa)
   
   
  0.555
adhA3
annotation not available (353 aa)
   
 
  0.554
adhA
annotation not available (342 aa)
   
 
  0.554
fruA
FRU- PTS system, Fru family, IIB component domain protein (585 aa)
         
  0.521
DR97_624
annotation not available (306 aa)
   
        0.499
nagE
PTS-II-BC-nag- PTS system, N-acetylglucosamine-specific IIBC component (570 aa)
   
   
  0.477
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (514 aa)
       
 
  0.474
frmA
adh_III_F_hyde- S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily (370 aa)
     
 
  0.473
pyc
Putative pyruvate carboxylase; Carbamoyl-phosphate synthase L chain, N-terminal domain protein (1096 aa)
     
        0.461
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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