DR97_795 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DR97_795

annotation not available (274 aa)

Predicted Functional Partners:

DR97_796

0.588

yjeF

0.550

DR97_25

0.480

ppsC

0.453

DR97_3851

0.441

DR97_1043

0.429

quiP

0.425

DR97_3821

0.424

DR97_4183

0.424

DR97_2319

0.404

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_1043	DR97_2319	DR97_1043	DR97_2319	annotation not available	annotation not available	0.757
DR97_1043	DR97_25	DR97_1043	DR97_25	annotation not available	Uncharacterized protein	0.760
DR97_1043	DR97_3821	DR97_1043	DR97_3821	annotation not available	annotation not available	0.679
DR97_1043	DR97_4183	DR97_1043	DR97_4183	annotation not available	Conserved hypothetical protein	0.768
DR97_1043	DR97_795	DR97_1043	DR97_795	annotation not available	annotation not available	0.429
DR97_2319	DR97_1043	DR97_2319	DR97_1043	annotation not available	annotation not available	0.757
DR97_2319	DR97_25	DR97_2319	DR97_25	annotation not available	Uncharacterized protein	0.778
DR97_2319	DR97_3821	DR97_2319	DR97_3821	annotation not available	annotation not available	0.551
DR97_2319	DR97_4183	DR97_2319	DR97_4183	annotation not available	Conserved hypothetical protein	0.701
DR97_2319	DR97_795	DR97_2319	DR97_795	annotation not available	annotation not available	0.404
DR97_2319	quiP	DR97_2319	DR97_912	annotation not available	annotation not available	0.458
DR97_25	DR97_1043	DR97_25	DR97_1043	Uncharacterized protein	annotation not available	0.760
DR97_25	DR97_2319	DR97_25	DR97_2319	Uncharacterized protein	annotation not available	0.778
DR97_25	DR97_3821	DR97_25	DR97_3821	Uncharacterized protein	annotation not available	0.712
DR97_25	DR97_4183	DR97_25	DR97_4183	Uncharacterized protein	Conserved hypothetical protein	0.735
DR97_25	DR97_795	DR97_25	DR97_795	Uncharacterized protein	annotation not available	0.480
DR97_25	quiP	DR97_25	DR97_912	Uncharacterized protein	annotation not available	0.490
DR97_3821	DR97_1043	DR97_3821	DR97_1043	annotation not available	annotation not available	0.679
DR97_3821	DR97_2319	DR97_3821	DR97_2319	annotation not available	annotation not available	0.551
DR97_3821	DR97_25	DR97_3821	DR97_25	annotation not available	Uncharacterized protein	0.712

page 1 of 3

Network

Neighborhood

Experiments

Cooccurrence

Textmining

Coexpression

Databases

Fusion

© STRING Consortium 2020

Credits

Access

Info

About