Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1043 | DR97_25 | DR97_1043 | DR97_25 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.760 |
DR97_1043 | DR97_3821 | DR97_1043 | DR97_3821 | annotation not available | annotation not available | 0.679 |
DR97_1043 | DR97_4183 | DR97_1043 | DR97_4183 | annotation not available | Conserved hypothetical protein | 0.768 |
DR97_1043 | DR97_795 | DR97_1043 | DR97_795 | annotation not available | annotation not available | 0.429 |
DR97_25 | DR97_1043 | DR97_25 | DR97_1043 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.760 |
DR97_25 | DR97_3821 | DR97_25 | DR97_3821 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.712 |
DR97_25 | DR97_4183 | DR97_25 | DR97_4183 | Hypothetical protein; Uncharacterized protein | Conserved hypothetical protein | 0.735 |
DR97_25 | DR97_795 | DR97_25 | DR97_795 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.480 |
DR97_25 | quiP | DR97_25 | DR97_912 | Hypothetical protein; Uncharacterized protein | Acyl-homoserine lactone acylase quip; Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of seven or more carbons in length). Appears to be the acyl-HSL acylase that underlies the ability of P.aeruginosa to degrade and utilize certain acyl-HSLs as growth nutrients, including one of its own quorum signals, 3-oxo-C12-HSL. Is thought to have a role in quorum quenching | 0.490 |
DR97_2714 | DR97_795 | DR97_2714 | DR97_795 | annotation not available | annotation not available | 0.433 |
DR97_2714 | nnrD | DR97_2714 | DR97_2302 | annotation not available | Adp-dependent nad(p)h-hydrate dehydratase / nad(p)h-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hyd [...] | 0.521 |
DR97_3821 | DR97_1043 | DR97_3821 | DR97_1043 | annotation not available | annotation not available | 0.679 |
DR97_3821 | DR97_25 | DR97_3821 | DR97_25 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.712 |
DR97_3821 | DR97_3851 | DR97_3821 | DR97_3851 | annotation not available | annotation not available | 0.400 |
DR97_3821 | DR97_4183 | DR97_3821 | DR97_4183 | annotation not available | Conserved hypothetical protein | 0.740 |
DR97_3821 | DR97_795 | DR97_3821 | DR97_795 | annotation not available | annotation not available | 0.424 |
DR97_3851 | DR97_3821 | DR97_3851 | DR97_3821 | annotation not available | annotation not available | 0.400 |
DR97_3851 | DR97_795 | DR97_3851 | DR97_795 | annotation not available | annotation not available | 0.454 |
DR97_4183 | DR97_1043 | DR97_4183 | DR97_1043 | Conserved hypothetical protein | annotation not available | 0.768 |
DR97_4183 | DR97_25 | DR97_4183 | DR97_25 | Conserved hypothetical protein | Hypothetical protein; Uncharacterized protein | 0.735 |
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