STRINGSTRING
DR97_813 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_813" - Conserved hypothetical protein in Pseudomonas aeruginosa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_813Conserved hypothetical protein (190 aa)    
Predicted Functional Partners:
psaB
annotation not available (168 aa)
 
 
  0.990
DR97_814
GGDEF- diguanylate cyclase domain protein (435 aa)
 
   
  0.964
DR97_4955
Putative competence protein; comEC_Rec2- DNA internalization-related competence protein ComEC/Rec2 (741 aa)
     
        0.720
DR97_4164
annotation not available (620 aa)
   
          0.556
def2
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (179 aa)
              0.517
DR97_817
Uncharacterized protein (124 aa)
 
          0.495
DR97_5798
annotation not available (98 aa)
   
          0.451
DR97_816
Uncharacterized protein (184 aa)
              0.426
DR97_3234
annotation not available (94 aa)
   
          0.414
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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