STRINGSTRING
psaB protein (Pseudomonas aeruginosa) - STRING interaction network
"psaB" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psaBannotation not available (168 aa)    
Predicted Functional Partners:
DR97_813
Conserved hypothetical protein (190 aa)
 
 
  0.990
DR97_814
GGDEF- diguanylate cyclase domain protein (435 aa)
 
          0.901
DR97_4730
annotation not available (146 aa)
           
  0.763
pal
Pal_lipo- peptidoglycan-associated lipoprotein; Belongs to the ompA family (168 aa)
   
     
  0.715
pleD_6
Response regulator PleD; GGDEF- diguanylate cyclase domain protein (275 aa)
           
  0.714
DR97_2973
annotation not available (341 aa)
         
  0.604
wspR
Two-component response regulator; GGDEF- diguanylate cyclase domain protein (347 aa)
           
  0.568
carA
CPSaseIIsmall- carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family (378 aa)
     
   
  0.564
tpbA
-tyrosine phosphatase family protein (218 aa)
           
  0.561
tolB
Protein TolB; Involved in the TonB-independent uptake of proteins (432 aa)
   
 
  0.553
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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