STRINGSTRING
DR97_830 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_830" - GGDEF: diguanylate cyclase domain protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_830GGDEF- diguanylate cyclase domain protein (398 aa)    
Predicted Functional Partners:
DR97_5603
annotation not available (587 aa)
 
  0.837
rocR
annotation not available (392 aa)
 
  0.830
DR97_3759
annotation not available (1417 aa)
 
 
  0.829
DR97_4041
annotation not available (526 aa)
 
  0.804
DR97_5719
annotation not available (285 aa)
 
  0.795
DR97_6230
annotation not available (531 aa)
 
     
  0.793
DR97_4616
Putative signaling protein PA3311; GGDEF- diguanylate cyclase domain protein (726 aa)
 
 
0.778
arr
annotation not available (525 aa)
 
     
  0.776
DR97_2126
annotation not available (393 aa)
 
 
  0.764
DR97_3764
Putative HDIG domain-containing protein (414 aa)
 
  0.674
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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