STRINGSTRING
sbnA protein (Pseudomonas aeruginosa) - STRING interaction network
"sbnA" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sbnAannotation not available (365 aa)    
Predicted Functional Partners:
cysE
cysE- serine O-acetyltransferase (258 aa)
   
  0.951
piuB
annotation not available (850 aa)
   
  0.938
metC
annotation not available (394 aa)
  0.935
cysI
annotation not available (552 aa)
   
 
  0.926
metZ
O_suc_HS_sulf- O-succinylhomoserine sulfhydrylase (403 aa)
 
  0.924
metH
metH- methionine synthase (1234 aa)
   
 
  0.904
DR97_6087
annotation not available (411 aa)
         
  0.902
mshD_2
annotation not available (173 aa)
   
        0.889
hcnC_1
annotation not available (375 aa)
   
   
  0.877
yijE_1
annotation not available (301 aa)
   
        0.856
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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