STRINGSTRING
ppiB protein (Pseudomonas aeruginosa) - STRING interaction network
"ppiB" - Peptidyl-prolyl cis-trans isomerase in Pseudomonas aeruginosa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
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[Homology]
Score
ppiBPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (165 aa)    
Predicted Functional Partners:
lpxH
lipid_A_lpxH- UDP-2,3-diacylglucosamine hydrolase (240 aa)
 
      0.931
glnS
glnS- glutamine--tRNA ligase (556 aa)
 
        0.782
lpsJ
pcaJ_scoB_fam- 3-oxoacid CoA-transferase, B subunit (218 aa)
           
  0.781
cysS
cysS- cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family (460 aa)
   
        0.722
DR97_5670
annotation not available (446 aa)
   
 
  0.666
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (469 aa)
   
 
  0.583
dbpA
ATP-independent RNA helicase dbpA; Helicase conserved C-terminal domain protein; Belongs to the DEAD box helicase family (458 aa)
 
 
 
  0.581
DR97_3396
ATP-dependent RNA helicase RhlE; DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA (639 aa)
 
 
 
  0.564
rpmF
rpmF_bact- ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family (60 aa)
           
  0.562
srmB
ATP-dependent RNA helicase; Helicase conserved C-terminal domain protein; Belongs to the DEAD box helicase family (441 aa)
 
 
 
  0.558
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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