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ygbF protein (Pseudomonas aeruginosa) - STRING interaction network
"ygbF" - Cell division coordinator CpoB in Pseudomonas aeruginosa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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ygbFCell division coordinator CpoB; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division (207 aa)    
Predicted Functional Partners:
tolB
Protein TolB; Involved in the TonB-independent uptake of proteins (432 aa)
 
   
  0.967
pal
Pal_lipo- peptidoglycan-associated lipoprotein; Belongs to the ompA family (168 aa)
 
 
  0.889
DR97_3867
Endolytic peptidoglycan transglycosylase RlpA; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides (342 aa)
 
   
  0.867
tolR
Biopolymer transport protein ExbD; tolR- protein TolR (146 aa)
 
   
  0.861
tolQ
tolQ- protein TolQ (231 aa)
 
     
  0.850
DR97_1664
Endolytic peptidoglycan transglycosylase RlpA; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides (125 aa)
     
   
  0.798
ybgC
thio_ybgC- tol-pal system-associated acyl-CoA thioesterase (148 aa)
   
   
  0.697
queE
7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds (215 aa)
 
          0.690
queC
7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)); Belongs to the QueC family (224 aa)
              0.619
yfiO
Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (341 aa)
 
 
  0.587
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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