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tolA protein (Pseudomonas aeruginosa) - STRING interaction network
"tolA" - Putative membrane protein in Pseudomonas aeruginosa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolAPutative membrane protein; tolA_full- protein TolA (347 aa)    
Predicted Functional Partners:
tolR
Biopolymer transport protein ExbD; tolR- protein TolR (146 aa)
   
 
  0.960
tolB
Protein TolB; Involved in the TonB-independent uptake of proteins (432 aa)
 
     
  0.927
tolQ
tolQ- protein TolQ (231 aa)
   
 
  0.907
pal
Pal_lipo- peptidoglycan-associated lipoprotein; Belongs to the ompA family (168 aa)
 
 
 
  0.816
ybgC
thio_ybgC- tol-pal system-associated acyl-CoA thioesterase (148 aa)
   
   
  0.805
DR97_3148
annotation not available (790 aa)
   
 
  0.699
DR97_6097
annotation not available (789 aa)
   
 
  0.691
DR97_265
Uncharacterized protein (268 aa)
 
 
 
  0.689
DR97_2284
annotation not available (289 aa)
   
          0.672
ruvA
Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB (201 aa)
   
        0.663
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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