STRINGSTRING
rbn protein (Pseudomonas aeruginosa) - STRING interaction network
"rbn" - yihY_not_rbn: YihY family inner membrane domain protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbnyihY_not_rbn- YihY family inner membrane domain protein (411 aa)    
Predicted Functional Partners:
hemL
hemL- glutamate-1-semialdehyde-2,1-aminomutase (427 aa)
           
  0.876
wrbA
NAD(P)H-quinone oxidoreductase, type IV; flav_wrbA- NAD(P)H-quinone oxidoreductase, type IV; Belongs to the WrbA family (198 aa)
              0.715
DR97_988
arsC- arsenate reductase (117 aa)
              0.715
glgX
Glycogen operon protein GlgX homolog; glgX_debranch- glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family (716 aa)
         
  0.666
DR97_990
Uncharacterized protein (139 aa)
              0.621
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate (372 aa)
   
   
  0.546
DR97_986
Uncharacterized protein (61 aa)
              0.503
DR97_2055
annotation not available (149 aa)
   
          0.474
DR97_4955
Putative competence protein; comEC_Rec2- DNA internalization-related competence protein ComEC/Rec2 (741 aa)
   
      0.472
DR97_4884
Conserved hypothetical protein (293 aa)
   
          0.471
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
Server load: low (15%) [HD]