STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT80937.1Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (334 aa)    
Predicted Functional Partners:
SIT80958.1
Peptide/nickel transport system permease protein.
 
  0.995
SIT87353.1
Oligopeptide transport system permease protein.
 
  0.991
SIT90187.1
Peptide/nickel transport system permease protein.
 
  0.989
SIT88852.1
Peptide/nickel transport system permease protein.
 
  0.987
SIT80942.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.967
SIT80954.1
Peptide/nickel transport system permease protein.
 
  0.956
SIT88262.1
Peptide/nickel transport system permease protein.
 
  0.910
SIT87351.1
Oligopeptide transport system permease protein.
 
  0.902
SIT88258.1
Peptide/nickel transport system permease protein.
 
  0.900
SIT90183.1
Peptide/nickel transport system permease protein.
 
  0.883
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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