STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps1730S ribosomal protein S17, chloroplastic; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (84 aa)    
Predicted Functional Partners:
rps12
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits.
  
 0.998
rps2
30S ribosomal protein S2, chloroplastic.
  
 0.998
rps14
30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.
  
 0.998
rpl2
50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family.
  
 
 0.997
rpl36
50S ribosomal protein L36, chloroplastic.
  
 
 0.996
rpl6
50S ribosomal protein L6, chloroplastic; Binds 23S rRNA.
  
 
 0.996
rpl5
50S ribosomal protein L5, chloroplastic; Binds 5S rRNA, forms part of the central protuberance of the 50S subunit.
  
 
 0.996
rpl27
50S ribosomal protein L27, chloroplastic.
  
 
 0.996
Esi_0108_0022
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.996
Esi_0144_0039
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.996
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.